DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kat60 and spast

DIOPT Version :10

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:XP_012818464.1 Gene:spast / 549207 XenbaseID:XB-GENE-947839 Length:603 Species:Xenopus tropicalis


Alignment Length:606 Identity:194/606 - (32%)
Similarity:298/606 - (49%) Gaps:127/606 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 TMTTTCSDR----QLLRGGKQKTTTCVGMTVMAKTTFEEICENA---------KLARDMALT--- 76
            |......||    :::|...|:....:.|.:......::..|.|         :|.:.:|:|   
 Frog    95 TAAAPAQDRPQEPEVVRSYHQQAFQYISMALRIDEEEKDQKEQAIQWYKKGIEELEKGIAVTITG 159

  Fly    77 --GNYDSACIYYEGLQGLLARQLKATADPLRKGKWSMINQQISQEHAKIKAIQRTLQDISLDLQS 139
              ..||.|    ..||..::..|....|.|             |..||:||          |:|.
 Frog   160 KGEQYDRA----RRLQAKMSTNLLMAKDRL-------------QLLAKLKA----------DIQG 197

  Fly   140 TKFAHKLRHQLSEESTTSKDPSAWFKPDPDIWTPPPKDPDVWGPPKPPPTTQAVGR-RAAPNNRR 203
               .|. :.::..::|.....:...||:... .|..|||       |..::.:..| :|||.   
 Frog   198 ---QHS-QMEVCSDNTNLPCRNGLLKPEKGA-VPKKKDP-------PSISSNSYSRVKAAPK--- 247

  Fly   204 TTPATQNSRPSSTIPQSTARN-GPASTRNSRNSTSATAPSGGARTTNGRAGGRKLSTSNTNEARD 267
             :.:..|..|:.|...|:||. ||            .|||                         
 Frog   248 -SGSLGNRIPNCTGVSSSARQAGP------------NAPS------------------------- 274

  Fly   268 DDSTAAGNNGGAAG--DGENGDPQAAQEEERKFQPNN--HIEAELVDILERDILQKDPKVRWSDI 328
                    |.||||  :.....|.......||....|  ::::.|.:::..:|:...|.|:::||
 Frog   275 --------NRGAAGKNNTRTNKPTTPTTAVRKKDMKNLRNVDSNLANLILNEIVDSGPTVKFADI 331

  Fly   329 ADLHDAKRLLEEAVVLPMLMPDYFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSA 393
            |....||:.|:|.|:||.:.|:.|.|:|.|.:|:|:.||||.||||||||||.|...||||:|:|
 Frog   332 AGQDLAKQALQEIVILPSIRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAA 396

  Fly   394 TLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDS-LCSRRGSESEHEASRRVKSELLVQMDGV 457
            :|||||.||.||:||.||.:||...||.|||||:|| ||.||  |.||:||||:|:|.|::.|||
 Frog   397 SLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERR--EGEHDASRRLKTEFLIEFDGV 459

  Fly   458 -GGGEEQAKVVMVLAATNFPWDIDEALRRRLEKRIYIPLPSDEGREALLKINL--REVKVDDSVD 519
             .||:::   |:|:.|||.|.::|:|:.||..||:|:.||::|.|..||| ||  ::....:..:
 Frog   460 QSGGDDR---VLVMGATNRPQELDDAVLRRFTKRVYVSLPNEETRLLLLK-NLLSKQGNPLNEKE 520

  Fly   520 LTYVANELKGYSGADITNVCREASMMSMRRKIAGLTPEQIRQLATEEVDLPVSNKDFNEAMSRCN 584
            ||.::...:||||:|||.:.::|::..:|.    |.|||::.:|..|: ..:...||..::.:..
 Frog   521 LTQLSRLTEGYSGSDITALAKDAALGPIRE----LKPEQVKNMAASEM-RNIKYSDFLSSLKKIK 580

  Fly   585 KSVSRADLDKYEKWMREFGSS 605
            .|||.:.|:.|.:|.:|||.:
 Frog   581 CSVSPSTLESYIRWNKEFGDT 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 Kp60-NTD 62..129 CDD:439297 18/80 (23%)
PHA03291 <167..>253 CDD:223033 20/87 (23%)
SpoVK 219..566 CDD:440232 140/355 (39%)
RecA-like_KTNA1 327..493 CDD:410930 93/167 (56%)
Vps4_C <570..603 CDD:462762 9/32 (28%)
spastXP_012818464.1 MIT_spastin 110..188 CDD:239142 17/94 (18%)
RecA-like_spastin 330..493 CDD:410932 93/167 (56%)
AAA_lid_3 520..554 CDD:465537 12/37 (32%)
Vps4_C <567..599 CDD:462762 9/31 (29%)

Return to query results.
Submit another query.