DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kat60 and spas

DIOPT Version :9

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_651206.3 Gene:spas / 42846 FlyBaseID:FBgn0039141 Length:758 Species:Drosophila melanogaster


Alignment Length:591 Identity:191/591 - (32%)
Similarity:296/591 - (50%) Gaps:114/591 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 KTTFEEICENAKLARDMALTGNYDSAC-IYYEGLQGLLARQLKATADPLRKGKWS---------- 110
            :..||.|.:..|:  |....|:.:.|. :|.:|        :|...|.:....||          
  Fly   234 RRAFEYISKALKI--DEENEGHKELAIELYRKG--------IKELEDGIAVDCWSGRGDVWDRAQ 288

  Fly   111 ------MINQQISQEHAKIKAIQRTLQDISLDLQSTKFAHKLRHQLSEESTTSKDPSAWFKPDPD 169
                  ..|..::::.....|::.  ||:.:...|.|...|...|...:.|              
  Fly   289 RLHDKMQTNLSMARDRLHFLALRE--QDLQMQRLSLKEKQKEEAQSKPQKT-------------- 337

  Fly   170 IWTPPPKDPDVWG----PPK---------PPPTTQ----AVGRRAAPNNRR-TTPATQNSRPSST 216
                  ::|.:.|    |.|         |..||.    |.||:....::| ...|..|.  |.|
  Fly   338 ------REPMLAGMTNEPMKLRVRSSGYGPKATTSAQPTASGRKLTIGSKRPVNLAVANK--SQT 394

  Fly   217 IPQST-ARNGPASTRNSRNSTSATAPSGGARTTNGRAGGRKLSTSNTNEARDDDSTAAGNNGGAA 280
            :|::. ::....:.:.....|:||.|:...:.::||         ||...|   |....||.|.:
  Fly   395 LPRNLGSKTSVGAVQRQPAKTAATPPAVRRQFSSGR---------NTPPQR---SRTPINNNGPS 447

  Fly   281 GDGENGDPQAAQEEERKFQPNNHIEAELVDILERDILQKDPKVRWSDIADLHDAKRLLEEAVVLP 345
            |.|.:....:.:..|:|          ||.::..:|::...||.|:|||....||:.|:|.|:||
  Fly   448 GSGASTPVVSVKGVEQK----------LVQLILDEIVEGGAKVEWTDIAGQDVAKQALQEMVILP 502

  Fly   346 MLMPDYFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSATLTSKYRGESEKMVRLL 410
            .:.|:.|.|:|.|.||:|:.||||.|||:||:||||||..||.|:|:|:|||||.|:.||:||.|
  Fly   503 SVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRAL 567

  Fly   411 FEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAATNF 475
            |.:||...||.|||||:|||.|.| |.||||||||:|:|.||:.||:.|..:..::| ||||||.
  Fly   568 FAVARHMQPSIIFIDEVDSLLSER-SSSEHEASRRLKTEFLVEFDGLPGNPDGDRIV-VLAATNR 630

  Fly   476 PWDIDEALRRRLEKRIYIPLPSDEGREALL-KINLREVKVDDSVDLTYVANELKGYSGADITNVC 539
            |.::|||..||..||:|:.||.::.||.|| ::..::....|:..|..:|....||||:|:|.:.
  Fly   631 PQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALA 695

  Fly   540 REASMMSMRRKIAGLTPEQIRQLATEEV---DL----PVSNKDFNEAMSRCNKSVSRADLDKYEK 597
            ::|::            |.||:|..|:|   |:    .::.:||:.::.|..:||:...|:.|||
  Fly   696 KDAAL------------EPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEK 748

  Fly   598 WMREFG 603
            |.:::|
  Fly   749 WSQDYG 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 HCV_NS5a_C <163..243 CDD:289693 20/98 (20%)
P-loop_NTPase 325..>381 CDD:304359 30/55 (55%)
AAA 358..496 CDD:214640 82/137 (60%)
AAA 362..495 CDD:278434 79/132 (60%)
Vps4_C <570..603 CDD:286426 10/32 (31%)
spasNP_651206.3 MIT_spastin 230..308 CDD:239142 14/83 (17%)
P-loop_NTPase 482..>538 CDD:304359 30/55 (55%)
AAA 515..652 CDD:214640 83/138 (60%)
AAA 519..650 CDD:278434 79/132 (60%)
Vps4_C <722..754 CDD:286426 10/31 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467076
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23074
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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