DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and Fggy

DIOPT Version :10

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001013954.2 Gene:Fggy / 298250 RGDID:1359429 Length:552 Species:Rattus norvegicus


Alignment Length:266 Identity:58/266 - (21%)
Similarity:87/266 - (32%) Gaps:113/266 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 NNGGAAGDGENGD---------PQAAQEEERKFQP-----NNHIEAELVDILERDILQKDPKVRW 325
            |.||.:..|:..|         |:...:...:.|.     |:|:          |:::|...|.:
  Rat   328 NEGGQSVTGKLIDHMVQSHPAFPELQAKATARCQSIYAYLNSHL----------DLIKKAQPVGF 382

  Fly   326 SDIADLHDAKRLLEEAVVLPMLMPDYFKGIRRPWKGVLMVGPPGTGKTM-----------LAKAV 379
            ..: |||              :.|| |.|.|.|...:.:.|.. ||.|:           ||...
  Rat   383 LTV-DLH--------------VWPD-FHGNRSPLADLTLKGMV-TGLTLSRDLDDLAVLYLATIQ 430

  Fly   380 ATECGTTFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASR 444
            |...||.|.              .|.|      .|..::.||:|      ||   |..|      
  Rat   431 AIAFGTRFI--------------IETM------EAAGHSLSTLF------LC---GGLS------ 460

  Fly   445 RVKSELLVQMDGVGGG-----EEQAKVVMVLAAT-------NFPWDIDEALRR-----------R 486
              |:.|.|||.....|     .::.:.|:|.||.       :|. .:.||:.|           |
  Rat   461 --KNPLFVQMHADITGMPVVLSQEVESVLVGAAILGACASGDFA-SVQEAMARMSKVGKVVFPER 522

  Fly   487 LEKRIY 492
            .:|:.|
  Rat   523 ADKKYY 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 Kp60-NTD 62..129 CDD:439297
PHA03291 <167..>253 CDD:223033
SpoVK 219..566 CDD:440232 58/266 (22%)
RecA-like_KTNA1 327..493 CDD:410930 46/200 (23%)
Vps4_C <570..603 CDD:462762
FggyNP_001013954.2 ASKHA_NBD_FGGY_D-RBK 12..545 CDD:466800 58/266 (22%)
Blue background indicates that the domain is not in the aligned region.

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