DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kat60 and Fign

DIOPT Version :9

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001099954.1 Gene:Fign / 295649 RGDID:1308174 Length:759 Species:Rattus norvegicus


Alignment Length:617 Identity:151/617 - (24%)
Similarity:251/617 - (40%) Gaps:170/617 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TLQDISLDLQSTKFAHKLRHQLSEESTTSKDPSAWFKPDPD------IWTPPPKDPDVWGPPKPP 187
            |:..:...|.|.::|..........:.:|:...|...|.|.      :..|||       ||.||
  Rat   172 TVPSLHAGLPSQEYAPGYNGSYLHSTYSSQPTPALPSPHPSPLHSSGLLQPPP-------PPPPP 229

  Fly   188 PTTQAVGRRAAPNNRRTTPATQNSRPSSTIPQSTARNGPASTRNSRNSTSATAPSG--------- 243
            |.       ..|....|:..:..|.||::.|..||.....|...:....||..|||         
  Rat   230 PA-------LVPGYNGTSNLSSYSYPSASYPPQTAVGSGYSPGGAPPPPSAYLPSGIPAPTPLPP 287

  Fly   244 -----------------GARTTNGRAG------------------------GRKLSTSNTNEARD 267
                             .:..||..|.                        |::.||.:......
  Rat   288 TTVPGYTYQGHGLTPIAPSALTNSSASSLKRKAFYMAGQGDMDSSYGNYSYGQQRSTQSPMYRMP 352

  Fly   268 DDSTAAGNNGGAAGDGENGDPQA----------AQEEERKFQ----------------------- 299
            |:|.:..|.|.  |...|.:..:          ..|::|||.                       
  Rat   353 DNSISNSNRGN--GFDRNAETSSLAFKPTKQLMPSEQQRKFSSQSSRALTPPSYSTAKNSLGSRS 415

  Fly   300 ------------------------------------PNNH--------IEAELVDILERDILQKD 320
                                                .:||        .:..|:|::..:|:.:.
  Rat   416 SESFGKYTSPVMSEHGDDHRQLLAHPIQGPGLRAATSSNHSVDEQLKNTDTHLIDLVTNEIITQG 480

  Fly   321 PKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGT 385
            |.|.|||||.|...|.:::|.|:.|:|..|.|.|:....:.:|:.||.|||||:|.:.:|::.|.
  Rat   481 PPVDWSDIAGLDLVKAVIKEEVLWPVLRSDAFSGLTALPRSILLFGPRGTGKTLLGRCIASQLGA 545

  Fly   386 TFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSEL 450
            |||.::.:.|.:|:.||:||::...|.:||...||.||:.:||.|.|.:.|| ||....|:::|.
  Rat   546 TFFKIAGSGLVAKWLGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVSE-EHSPVSRMRTEF 609

  Fly   451 LVQMDGV-GGGEEQAKVVMVLAATNFPWDIDEALRRRLEKRIYIPLPSDEGREALL--KINLREV 512
            |:|:|.| ...|:|   ::|:.||:.|.:|||:|||...||:.||||....|..::  .::....
  Rat   610 LMQLDTVLTSAEDQ---IVVICATSKPEEIDESLRRYFMKRLLIPLPDSTARHQIIVQLLSQHNY 671

  Fly   513 KVDDSVDLTYVANELKGYSGADITNVCREASMMSMR----RKIAGLTPEQIRQLATEEVDLPVSN 573
            .::|. :...:....:|:||.|:.::|:||::..:.    ..::.:.|.|:|         |::.
  Rat   672 CLNDK-EFALLVQRTEGFSGLDVAHLCQEAAVGPLHAMPATDLSAIMPSQLR---------PITY 726

  Fly   574 KDFNEAMSRCNKSVSRADLDKYEKWMREFGSS 605
            :||..|..:...|:|:.:||.|.:|.:.||.|
  Rat   727 QDFENAFCKIQPSISQKELDMYVEWNKMFGCS 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 HCV_NS5a_C <163..243 CDD:289693 22/85 (26%)
P-loop_NTPase 325..>381 CDD:304359 23/55 (42%)
AAA 358..496 CDD:214640 57/138 (41%)
AAA 362..495 CDD:278434 56/133 (42%)
Vps4_C <570..603 CDD:286426 10/32 (31%)
FignNP_001099954.1 AAA 519..654 CDD:214640 58/138 (42%)
AAA 522..652 CDD:278434 56/133 (42%)
Vps4_C <723..756 CDD:286426 10/32 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351765
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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