DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and Fign

DIOPT Version :10

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001099954.1 Gene:Fign / 295649 RGDID:1308174 Length:759 Species:Rattus norvegicus


Alignment Length:617 Identity:151/617 - (24%)
Similarity:251/617 - (40%) Gaps:170/617 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TLQDISLDLQSTKFAHKLRHQLSEESTTSKDPSAWFKPDPD------IWTPPPKDPDVWGPPKPP 187
            |:..:...|.|.::|..........:.:|:...|...|.|.      :..|||       ||.||
  Rat   172 TVPSLHAGLPSQEYAPGYNGSYLHSTYSSQPTPALPSPHPSPLHSSGLLQPPP-------PPPPP 229

  Fly   188 PTTQAVGRRAAPNNRRTTPATQNSRPSSTIPQSTARNGPASTRNSRNSTSATAPSG--------- 243
            |.       ..|....|:..:..|.||::.|..||.....|...:....||..|||         
  Rat   230 PA-------LVPGYNGTSNLSSYSYPSASYPPQTAVGSGYSPGGAPPPPSAYLPSGIPAPTPLPP 287

  Fly   244 -----------------GARTTNGRAG------------------------GRKLSTSNTNEARD 267
                             .:..||..|.                        |::.||.:......
  Rat   288 TTVPGYTYQGHGLTPIAPSALTNSSASSLKRKAFYMAGQGDMDSSYGNYSYGQQRSTQSPMYRMP 352

  Fly   268 DDSTAAGNNGGAAGDGENGDPQA----------AQEEERKFQ----------------------- 299
            |:|.:..|.|.  |...|.:..:          ..|::|||.                       
  Rat   353 DNSISNSNRGN--GFDRNAETSSLAFKPTKQLMPSEQQRKFSSQSSRALTPPSYSTAKNSLGSRS 415

  Fly   300 ------------------------------------PNNH--------IEAELVDILERDILQKD 320
                                                .:||        .:..|:|::..:|:.:.
  Rat   416 SESFGKYTSPVMSEHGDDHRQLLAHPIQGPGLRAATSSNHSVDEQLKNTDTHLIDLVTNEIITQG 480

  Fly   321 PKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGT 385
            |.|.|||||.|...|.:::|.|:.|:|..|.|.|:....:.:|:.||.|||||:|.:.:|::.|.
  Rat   481 PPVDWSDIAGLDLVKAVIKEEVLWPVLRSDAFSGLTALPRSILLFGPRGTGKTLLGRCIASQLGA 545

  Fly   386 TFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSEL 450
            |||.::.:.|.:|:.||:||::...|.:||...||.||:.:||.|.|.:.|| ||....|:::|.
  Rat   546 TFFKIAGSGLVAKWLGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVSE-EHSPVSRMRTEF 609

  Fly   451 LVQMDGV-GGGEEQAKVVMVLAATNFPWDIDEALRRRLEKRIYIPLPSDEGREALL--KINLREV 512
            |:|:|.| ...|:|   ::|:.||:.|.:|||:|||...||:.||||....|..::  .::....
  Rat   610 LMQLDTVLTSAEDQ---IVVICATSKPEEIDESLRRYFMKRLLIPLPDSTARHQIIVQLLSQHNY 671

  Fly   513 KVDDSVDLTYVANELKGYSGADITNVCREASMMSMR----RKIAGLTPEQIRQLATEEVDLPVSN 573
            .::|. :...:....:|:||.|:.::|:||::..:.    ..::.:.|.|:|         |::.
  Rat   672 CLNDK-EFALLVQRTEGFSGLDVAHLCQEAAVGPLHAMPATDLSAIMPSQLR---------PITY 726

  Fly   574 KDFNEAMSRCNKSVSRADLDKYEKWMREFGSS 605
            :||..|..:...|:|:.:||.|.:|.:.||.|
  Rat   727 QDFENAFCKIQPSISQKELDMYVEWNKMFGCS 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 Kp60-NTD 62..129 CDD:439297 151/617 (24%)
PHA03291 <167..>253 CDD:223033 25/117 (21%)
SpoVK 219..566 CDD:440232 116/480 (24%)
RecA-like_KTNA1 327..493 CDD:410930 67/166 (40%)
Vps4_C <570..603 CDD:462762 10/32 (31%)
FignNP_001099954.1 RecA-like_fidgetin 487..650 CDD:410931 67/166 (40%)
AAA_lid_3 675..>706 CDD:465537 8/31 (26%)
Vps4_C <723..756 CDD:462762 10/32 (31%)

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