DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and vps-4

DIOPT Version :10

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_490816.4 Gene:vps-4 / 189590 WormBaseID:WBGene00021334 Length:430 Species:Caenorhabditis elegans


Alignment Length:356 Identity:141/356 - (39%)
Similarity:211/356 - (59%) Gaps:50/356 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 DGENGDPQAAQEEERKFQPNNHIEAELVDILERDILQKDPKVRWSDIADLHDAKRLLEEAVVLPM 346
            ||:  |.....|:::|||          |.|...|:.:.|.|:|:|||.|..||..|:|||:||:
 Worm    86 DGK--DDSDEDEDKKKFQ----------DKLSGAIVMEKPNVKWTDIAGLEGAKEALKEAVILPI 138

  Fly   347 LMPDYFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECG-TTFFNVSSATLTSKYRGESEKMVRLL 410
            ..|..|.|.|:||:|:|:.|||||||:.:|||||||.| :|||::||:.|.||:.|||||:|:.|
 Worm   139 KFPQLFTGNRKPWQGILLFGPPGTGKSYIAKAVATEAGESTFFSISSSDLMSKWLGESEKLVKNL 203

  Fly   411 FEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAATNF 475
            |.:||.:.||.|||||||||||.| |::|.|::||:|:|.:|||.|||...:.   ::||.|||.
 Worm   204 FALAREHKPSIIFIDEIDSLCSAR-SDNESESARRIKTEFMVQMQGVGLNNDG---ILVLGATNI 264

  Fly   476 PWDIDEALRRRLEKRIYIPLPSDEGREALLKINL-REVKVDDSVDLTYVANELKGYSGADITNVC 539
            ||.:|.|:|||.|||||||||....|:.:.:|:: :........|...:|...:||||.||:.:.
 Worm   265 PWILDSAIRRRFEKRIYIPLPDIHARKEMFRIDVGKNYNTLTDQDFKVLAERCEGYSGYDISILV 329

  Fly   540 REASMMSMRR--------KIAGLTPEQIRQLATEEV------------------------DLPVS 572
            ::|.|..:||        .::|.:|:....:|.:.:                        :.|:|
 Worm   330 KDALMQPVRRVQSATHFKHVSGPSPKDPNVIAHDLLTPCSPGDPHAIAMNWLDVPGDKLANPPLS 394

  Fly   573 NKDFNEAMSRCNKSVSRADLDKYEKWMREFG 603
            .:|.:.:::....:|:..|||:.|.:..:||
 Worm   395 MQDISRSLASVKPTVNNTDLDRLEAFKNDFG 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 Kp60-NTD 62..129 CDD:439297
PHA03291 <167..>253 CDD:223033
SpoVK 219..566 CDD:440232 131/293 (45%)
RecA-like_KTNA1 327..493 CDD:410930 96/166 (58%)
Vps4_C <570..603 CDD:462762 8/32 (25%)
vps-4NP_490816.4 MIT_VPS4 4..79 CDD:239141
RecA-like_VPS4 112..282 CDD:410929 99/173 (57%)
AAA_lid_3 307..350 CDD:465537 12/42 (29%)
Vps4_C 365..425 CDD:462762 8/59 (14%)
Blue background indicates that the domain is not in the aligned region.

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