DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and shpk-1

DIOPT Version :9

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001366916.1 Gene:shpk-1 / 188886 WormBaseID:WBGene00012017 Length:430 Species:Caenorhabditis elegans


Alignment Length:365 Identity:73/365 - (20%)
Similarity:122/365 - (33%) Gaps:121/365 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 DGENGDPQAAQEEERKFQPNNHIEAELVDILER---DILQKDPK-------------VRWSDIAD 330
            :|:|.|....|..:...|       .::|:|||   ::..::.|             |.|....:
 Worm    35 EGDNSDAAGLQNPKIIIQ-------TVLDLLERTKSNLESRNLKISNIWTCGQMHGIVMWKQRQN 92

  Fly   331 LHDAKRLLEEAVVLPML--------MPDYFKGIRRPWK-GVLMVGPPGTGKTMLA---------K 377
            ..|    ||...:.|:.        :|.:.|.|.: |: |.|   .||.|...||         .
 Worm    93 EID----LETLTISPLYNWTYSSTELPAFLKTIPK-WECGDL---HPGFGLVTLAFLNYSNPEFL 149

  Fly   378 AVATECGT---TFFNVSSAT---LTSKYRGESEKMVRLLFEMARF------YAPSTIFIDEIDSL 430
            .....|||   .|.::.:..   |.|.:...|.....   |.|.:      :.|.|:.:.:|:| 
 Worm   150 TNFIHCGTIMDLFISILTQNPDPLISHHNAHSWGYCT---ENATWQSEILDFLPKTLKLPDINS- 210

  Fly   431 CSRRGSESEHEASRRVKS-ELLVQMDGVGGGEEQAKVVM------------------VLAAT--N 474
             |...|.:.|.|...|.| :|...:..:...|..|.|::                  |:.||  .
 Worm   211 -SSEVSGTWHGAKCHVASGDLQASVASLDYYENTAYVILGTSAQLCCLIQTSEKNATVIPATVVR 274

  Fly   475 FPWDIDEALRRRLEKRIYIPLPSDEGREALLKINLREVKVDDSVDLTYVANELKGYSGADITNVC 539
            .|:...:.|...      ..:......||.||:|..||         |.:|.|:           
 Worm   275 LPFSTSKTLVAA------CAMNGGNALEATLKMNSPEV---------YSSNRLQ----------- 313

  Fly   540 REASMMSMRRKIAGLTPEQIRQLATEEVDLPV--SNKDFN 577
               .:::...|.|...|..:|   .:.:.:|.  |:|.|:
 Worm   314 ---ELLNQLDKSAPAMPPNLR---IDPIFIPERGSSKTFS 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 HCV_NS5a_C <163..243 CDD:289693
P-loop_NTPase 325..>381 CDD:304359 16/73 (22%)
AAA 358..496 CDD:214640 36/180 (20%)
AAA 362..495 CDD:278434 34/174 (20%)
Vps4_C <570..603 CDD:286426 4/10 (40%)
shpk-1NP_001366916.1 FGGY_SHK_like 4..430 CDD:212661 73/365 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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