DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and spas-1

DIOPT Version :9

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001256115.1 Gene:spas-1 / 179300 WormBaseID:WBGene00016045 Length:512 Species:Caenorhabditis elegans


Alignment Length:453 Identity:160/453 - (35%)
Similarity:234/453 - (51%) Gaps:82/453 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 AVGRRAAPNNRRTTPATQNSRPSSTIPQSTARNGPASTRNSRNSTSATAPSGGARTTNGRAGGRK 256
            |:.....||.:::..||..  ||.  |.|.||..|..||       ||||               
 Worm   100 AICNEVDPNVKQSRSATVG--PSR--PASAARVTPRPTR-------ATAP--------------- 138

  Fly   257 LSTSNTNEARDDDST----AAGNNGGA-------AGDGENGDPQAAQEEERKFQPNNHIEAEL-- 308
             ...|..:|:::|..    :.|:..||       ..|..:.:| ..|...||.:....::.:.  
 Worm   139 -EKKNAAKAKENDENRHVCSRGDRCGAHHQPVTKKSDTVHPEP-PVQASNRKMETVKRVKVDKAS 201

  Fly   309 ----------------VD--ILER--DILQKDPKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFK 353
                            ||  |.||  |.:..:..||..|:|..|.||..|||||:||.|.|:.||
 Worm   202 LPMHQNPVNRAALLNGVDKVIGERLLDEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNLFK 266

  Fly   354 GIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSATLTSKYRGESEKMVRLLFEMARFYA 418
            |:|:|.||:|:.||||.|||:||||||.|....|||:|:::||||:.|:|||.:|.||::||...
 Worm   267 GLRQPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNAQ 331

  Fly   419 PSTIFIDEIDS-LCSRRGSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDEA 482
            ||.|||||||| ||.|  ||.:.|.|||:|:|.|||.||.....:..  ::|:.|||.|.::|:|
 Worm   332 PSIIFIDEIDSILCER--SEKDAEVSRRMKTEFLVQFDGATSSADDR--ILVIGATNRPHELDDA 392

  Fly   483 LRRRLEKRIYIPLPSDEGREALLKINLREVKVDD---SVDLTYVANELKGYSGADITNVCREASM 544
            :.||..|||.:.||.:|.|:.|:...|::..:.|   |.|:.|:|:...|:|.:|:..:|:||:|
 Worm   393 VLRRFPKRIMLNLPDEEARKELITKTLKKHNMMDGLISSDIRYIASNTSGFSNSDLVALCKEAAM 457

  Fly   545 MSMRR----KIAGLTPEQIRQLATEEVDLPVSNKDFNEAMSRCNKSVSRADLDKYEKWMREFG 603
            :.:|.    |::....|:||::..         .||:.|:.....|.|:..:.|...:.|.||
 Worm   458 VPIREIDRSKLSMTDGEKIRKIRA---------SDFDTALRTIRPSTSQKIMSKLSDFSRSFG 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 HCV_NS5a_C <163..243 CDD:289693 18/50 (36%)
P-loop_NTPase 325..>381 CDD:304359 34/55 (62%)
AAA 358..496 CDD:214640 73/138 (53%)
AAA 362..495 CDD:278434 70/133 (53%)
Vps4_C <570..603 CDD:286426 7/32 (22%)
spas-1NP_001256115.1 flhF 105..>298 CDD:235570 72/220 (33%)
SpoVK <209..498 CDD:223540 127/301 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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