DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kat60 and rpt-2

DIOPT Version :10

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_504558.1 Gene:rpt-2 / 178988 WormBaseID:WBGene00004502 Length:443 Species:Caenorhabditis elegans


Alignment Length:330 Identity:106/330 - (32%)
Similarity:170/330 - (51%) Gaps:34/330 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 GRKLSTSNTNEARDDDSTAAGNNGGAAGDGENGDPQAAQEEERKFQPN-----NHIEAELVDILE 313
            |..::..:..|..||.......|.|:    |:.....:..::.:.:|.     ||....::.:|.
 Worm   107 GTPMAVGSLEEIIDDQHAIVSTNVGS----EHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLS 167

  Fly   314 RDI--------LQKDPKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFK--GIRRPWKGVLMVGPP 368
            .|.        |:|.|:..::|:..|....:.::|||.||:..|:|::  |||.| |||::.|.|
 Worm   168 DDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPP-KGVILYGCP 231

  Fly   369 GTGKTMLAKAVATECGTTFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDSLCSR 433
            |||||:||||||.:...||..:..:.|..||.|:..||||.||.:|...|||.:||||||::.::
 Worm   232 GTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTK 296

  Fly   434 R-----GSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDEALRR--RLEKRI 491
            |     |.|.|   .:|...|||.|:||.....:    |.||.|||....:|.||.|  |::::|
 Worm   297 RYDSNSGGERE---IQRTMLELLNQLDGFDSRGD----VKVLMATNRIESLDPALIRPGRIDRKI 354

  Fly   492 YIPLPSDEGREALLKINLREVKVDDSVDLTYVANELKGYSGADITNVCREASMMSMRRKIAGLTP 556
            ..|||.::.:..:.:|:...:.:...|:|..........|||||..:|.||.::::|.:...:|.
 Worm   355 EFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTM 419

  Fly   557 EQIRQ 561
            |..::
 Worm   420 EDFQK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 Kp60-NTD 62..129 CDD:439297
PHA03291 <167..>253 CDD:223033
SpoVK 219..566 CDD:440232 106/330 (32%)
RecA-like_KTNA1 327..493 CDD:410930 74/174 (43%)
Vps4_C <570..603 CDD:462762
rpt-2NP_504558.1 PTZ00361 1..443 CDD:185575 106/330 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.