DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and F56F11.4

DIOPT Version :9

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001367906.1 Gene:F56F11.4 / 175403 WormBaseID:WBGene00018991 Length:432 Species:Caenorhabditis elegans


Alignment Length:427 Identity:127/427 - (29%)
Similarity:196/427 - (45%) Gaps:73/427 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 PNNRRTTPATQNSRPSSTIPQSTARNGPASTRNSRNSTSATAPSGGARTTNGRAGGRKLSTSNTN 263
            ||:|:......||...:..|....:...|....:..|.:........:..||:....|...|:.:
 Worm    29 PNSRKPATLDANSDEQTLRPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLH 93

  Fly   264 EARDDDSTAAGNNGGAAGDGENGDPQAAQEEERKFQPNNHIEAE-LVDI---------------- 311
            |           .|...|:      .....:::|....||.:.: :||:                
 Worm    94 E-----------QGSHVGE------VCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVA 141

  Fly   312 LERD-------------------ILQKDPKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFK--GI 355
            |..|                   :::|.|...:..:..|....:.::|.:.||:..|:.|.  ||
 Worm   142 LRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGI 206

  Fly   356 RRPWKGVLMVGPPGTGKTMLAKAVA--TECGTTFFNVSSATLTSKYRGESEKMVRLLFEMARFYA 418
            .:| ||||:.||||||||:||:|||  |||  ||..||.:.|..|:.||..:|||.||.|||.:|
 Worm   207 AQP-KGVLLYGPPGTGKTLLARAVAHHTEC--TFIRVSGSELVQKFIGEGARMVRELFVMAREHA 268

  Fly   419 PSTIFIDEIDSLCSRR--GSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDE 481
            ||.||:|||||:.|.|  ||.......:|...|||.|:||.    |..|.:.|:.|||....:|.
 Worm   269 PSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGF----EATKNIKVIMATNRIDILDS 329

  Fly   482 ALRR--RLEKRIYIPLPSDEGREALLKINLREVKVDDSVDLTYVANELKGYSGADITNVCREASM 544
            ||.|  |::::|..|.|.::.|..:|||:.|::.:...:.:..:|.::.|.|||::.:||.||.|
 Worm   330 ALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGM 394

  Fly   545 MSMRRKIAGLTPEQIRQLATEEVDLPVSNKDFNEAMS 581
            .::|.:...:|.|.......:     |..||..:.||
 Worm   395 FALRERRIHVTQEDFEMAVGK-----VMQKDSEKNMS 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 HCV_NS5a_C <163..243 CDD:289693 8/43 (19%)
P-loop_NTPase 325..>381 CDD:304359 26/59 (44%)
AAA 358..496 CDD:214640 71/143 (50%)
AAA 362..495 CDD:278434 67/138 (49%)
Vps4_C <570..603 CDD:286426 5/12 (42%)
F56F11.4NP_001367906.1 RPT1 51..430 CDD:224143 121/405 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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