DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kat60 and atad2b

DIOPT Version :9

Sequence 1:NP_001262276.1 Gene:Kat60 / 53566 FlyBaseID:FBgn0040208 Length:605 Species:Drosophila melanogaster
Sequence 2:NP_001352895.1 Gene:atad2b / 100331225 ZFINID:ZDB-GENE-110411-210 Length:1402 Species:Danio rerio


Alignment Length:677 Identity:162/677 - (23%)
Similarity:241/677 - (35%) Gaps:232/677 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 MINQQISQEH--------AKIKAIQRTLQDIS-----LDLQSTKFAHKLRHQLSEESTTSKDPSA 162
            |:|.:.|.||        .:.::.||...::.     :..:.|..|:.||.        .|:||:
Zfish     1 MVNTRKSSEHKPSSPFISGRTRSSQRNNPNLDEHNSRVRKRETPAAYSLRQ--------PKEPSS 57

  Fly   163 WFKPDPDIWTPPPKDPDVWGPPK---PPPTTQAVGRRAAPN-----NRRTTPATQNS-------- 211
            .........:||||......||.   ..|:.|:.|:|.:..     .|.:|.|.||.        
Zfish    58 DANSSSPRLSPPPKRTRRQTPPSSTDTSPSPQSKGQRGSWTMSKHCTRLSTGALQNGHTIGRMSL 122

  Fly   212 RPSSTIPQSTAR-NGPASTRNSR--------------------NSTSATA--------------- 240
            |..||.....|| ||....:.||                    |||:...               
Zfish   123 RGDSTSGGDHARMNGHVELKRSRRVRKSQFEHLNQSLLFDQLVNSTAEAVLQEMDNISSIRQSRE 187

  Fly   241 -----------------------PSGGARTTNGRAGGRKL-----------STSNTN-------- 263
                                   .....|.|.|.....|:           .|..:|        
Zfish   188 VERLRMWTDTELENMDMYSRVKRRKSLRRNTYGMQSHHKVMSKSKDPEEEEGTEESNEEGEEDED 252

  Fly   264 -EARDDDSTAAGNNGGAAGDGENGDP--------------------------------------- 288
             ||.|||....|:....||: ||..|                                       
Zfish   253 VEADDDDEDDEGDEAEEAGE-ENDRPYNLRQRKTVQRYEAPPIEPVNRKQSKGSLFDTHRSPARR 316

  Fly   289 --------------QAAQEEERKFQ---------------PNN---------------HIEAELV 309
                          ..:..:|.:|:               |.|               .:.|.|.
Zfish   317 SHIRIKKHAIHSSESTSSSDEERFERRKSKSMSRARNRCLPMNLRAEDLASGVLRDRVKVGASLA 381

  Fly   310 DILERDILQKDPKVRWSDIADLHDAKRLLEEAVVLPMLMPDYFKGIR-RPWKGVLMVGPPGTGKT 373
            |:   |.:..|..|::..:..|....:.|:|.||.|:|.|..|:..: :|.:|.|..||||||||
Zfish   382 DV---DPMNLDTSVKFDSVGGLTHHIQSLKEMVVFPLLYPQVFEKFKIQPPRGCLFYGPPGTGKT 443

  Fly   374 MLAKAVATECG-----TTFFNVSSATLTSKYRGESEKMVRLLFEMARFYAPSTIFIDEIDSLCSR 433
            ::|:|:|.||.     .:||....|...||:.||||:.:||||:.|....||.||.||||.|...
Zfish   444 LVARALANECSQGDRKVSFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPV 508

  Fly   434 RGSESEHEASRRVKSELLVQMDGVGGGEEQAKVVMVLAATNFPWDIDEALRR--RLEKRIYIPLP 496
            |.|..: :....:.|.||..|||:....|    ::|:.|||....||.||||  |.::.....||
Zfish   509 RSSRQD-QIHSSIVSTLLALMDGLDSRGE----IVVIGATNRLDSIDPALRRPGRFDREFLFNLP 568

  Fly   497 SDEGREALLKINLR-------EVKVDDSVDLTYVANELKGYSGADITNVCREASMMSMRRKIAGL 554
            ..:.|:.:|:|:.|       |..:|:      :|....||.||||..:|.||::.::||:...:
Zfish   569 DKKARKHILEIHTRDWSPKLAEPFIDE------LAERCVGYCGADIKALCTEAALAALRRRYPQI 627

  Fly   555 TPEQIR-QLATEEVDLPVSNKDFNEAM 580
            .....| ||  :...:.:..:||..|:
Zfish   628 YGSSQRYQL--DVASIVLGPQDFGRAL 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kat60NP_001262276.1 HCV_NS5a_C <163..243 CDD:289693 27/154 (18%)
P-loop_NTPase 325..>381 CDD:304359 22/56 (39%)
AAA 358..496 CDD:214640 59/144 (41%)
AAA 362..495 CDD:278434 57/139 (41%)
Vps4_C <570..603 CDD:286426 3/11 (27%)
atad2bNP_001352895.1 SpoVK <341..657 CDD:223540 102/328 (31%)
P-loop_NTPase 767..879 CDD:328724
Bromo_AAA 957..1068 CDD:99957
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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