DRSC/TRiP Functional Genomics Resources

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Protein Alignment bor and atad-3

DIOPT Version :9

Sequence 1:NP_001247135.1 Gene:bor / 53565 FlyBaseID:FBgn0287225 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_496210.2 Gene:atad-3 / 174590 WormBaseID:WBGene00010015 Length:595 Species:Caenorhabditis elegans


Alignment Length:587 Identity:317/587 - (54%)
Similarity:431/587 - (73%) Gaps:17/587 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSWLLG-RNRQQPQ-PDQ-TAGFSEGGGAADPEGRTAGEKSGDSQLSRAERKAMEAYRFDSSALE 62
            ||||.| :....|| ||. .||.:.||.....:|:   .:.|:|::         ||.|||:|||
 Worm     1 MSWLFGVQKNATPQIPDDFQAGAAPGGPQQPGQGQ---RQEGNSKM---------AYSFDSTALE 53

  Fly    63 RAADAAKTLERSKHAREALELSKMQEATRQTEYNTKVKEYEAHIEQAKVEQKRIDHEERRKTLIE 127
            |||.||:.||:..:|:||||||:|||.|||.|...:.|:.||.:...|.|..|:..|||||||.|
 Worm    54 RAAKAARDLEKFPNAKEALELSRMQEVTRQKEVENETKKIEAQLANMKSEHIRVAEEERRKTLGE 118

  Fly   128 ETKQQQQRAQYQDQLSRKRYEDQLLQQQRVQEENLRKQEESVQRQEAMRRQTIEHEIEMKEKNRL 192
            |||....||:|||||:|||.|::|..:.|:|||:||||||||::||.:|:||||||:.:|.|..|
 Worm   119 ETKHAHSRAEYQDQLARKRAEEELAMKARMQEESLRKQEESVKKQEQLRKQTIEHELALKHKYEL 183

  Fly   193 KLLEHELRAKARVDRENRDINLEKIRLKAQEHRTTVLEGIKTAGTVIGAGAEAMLTDWDKVLTAA 257
            :.::.|.||:|:..|:|||:|||:::|..:|:|.||:|.|||:|.:||:|....|.|..|:..|.
 Worm   184 EKIDAETRARAKAARDNRDVNLEQMKLHEEENRKTVIEKIKTSGELIGSGLNQFLNDKTKIAAAV 248

  Fly   258 GGLSLLALGVYTAKGATGVVSRYVEARIGKPTLVGETSRFAFLDALKNPLHYLKRLRAKPTDALQ 322
            |||:.||:|.||||..|||.:||:|:|:|||:||.||||...|:.||:|:..::.:..:..|.|.
 Worm   249 GGLTALAVGWYTAKRGTGVTARYIESRLGKPSLVRETSRITPLEVLKHPIKSVQMMTRQKKDPLN 313

  Fly   323 GVVLNPKLEERLRDIAIATKNTRINKGMYRNVLMHGPPGTGKTMFAKKLAEHSGMDFAIMTGGDV 387
            ||||.|.||.|||||||.|.||:.|.|::|||:.:||||||||:|||.||:|||:|:|::||||:
 Worm   314 GVVLPPALERRLRDIAITTSNTKRNNGLFRNVMFYGPPGTGKTLFAKSLAQHSGLDYAVLTGGDI 378

  Fly   388 APMGKEGVTAIHKVFDWSHTSRRGLLLFVDEADAFLRKRSSEKISEDLRAALNAFLYRTSEQNPK 452
            ||:|::||:||||||||:..||:||::|:|||||||:|||...:|||.||||||||:||.||:.|
 Worm   379 APLGRDGVSAIHKVFDWASKSRKGLIVFIDEADAFLQKRSKNGMSEDTRAALNAFLFRTGEQSRK 443

  Fly   453 FMLVLASNTPEQFDYAINDRLDEMVEFTLPGLEERERLLRLYFDKYVLQPAAAGAK--RFKLDTF 515
            ||||:|||.|||||:|:|||.|::|||||||:|||||:|..||:::::.||.:|::  |.|||.|
 Worm   444 FMLVVASNQPEQFDWAVNDRFDQLVEFTLPGMEERERILLQYFNEHIVTPATSGSRSQRLKLDNF 508

  Fly   516 DYGKTCSKMAALCEGMSGREISKLGVSWQAAVYASEDGLLTEKMVLDRCYSAAQQHKQKMAWLSD 580
            |:...|:::|....||||||:|||.:.|||:.||||.|:|||.:|......|..||:.||.||..
 Worm   509 DWVAKCNEVAKKTSGMSGRELSKLVIGWQASAYASETGVLTEAIVDRNTADAMVQHEHKMEWLEK 573

  Fly   581 QE 582
            ::
 Worm   574 EQ 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
borNP_001247135.1 DUF3523 34..291 CDD:314848 132/256 (52%)
COG1855 <326..>373 CDD:333139 31/46 (67%)
AAA 354..481 CDD:306510 87/126 (69%)
atad-3NP_496210.2 DUF3523 38..283 CDD:288859 133/253 (53%)
AAA 343..473 CDD:214640 90/129 (70%)
AAA 345..472 CDD:278434 87/126 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 264 1.000 Domainoid score I1018
eggNOG 1 0.900 - - E1_COG1223
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10059
Inparanoid 1 1.050 623 1.000 Inparanoid score I477
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57704
OrthoDB 1 1.010 - - D262055at33208
OrthoFinder 1 1.000 - - FOG0003108
OrthoInspector 1 1.000 - - oto18440
orthoMCL 1 0.900 - - OOG6_103580
Panther 1 1.100 - - LDO PTHR23075
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2413
SonicParanoid 1 1.000 - - X2080
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.870

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