DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment retinin and CG34267

DIOPT Version :10

Sequence 1:NP_524995.2 Gene:retinin / 53564 FlyBaseID:FBgn0040074 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001097464.1 Gene:CG34267 / 5740365 FlyBaseID:FBgn0085296 Length:77 Species:Drosophila melanogaster


Alignment Length:68 Identity:20/68 - (29%)
Similarity:31/68 - (45%) Gaps:12/68 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 ASSGSADPISGRLVSAGIPVSVPLPLILAARNGLRTVLTIQEPAVAKVGEVVQHVPTAVSHQTQT 147
            |:.|..:|..|     .:||:..:|::       ::|..:|...|.|...||||||...|:...|
  Fly    17 AAPGYIEPSYG-----VVPVAQVVPVV-------KSVPVVQHVPVVKNVPVVQHVPVLKSYAVPT 69

  Fly   148 VVH 150
            ..|
  Fly    70 YGH 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
retininNP_524995.2 Retinin_C 122..>169 CDD:427994 12/29 (41%)
CG34267NP_001097464.1 None

Return to query results.
Submit another query.