DRSC/TRiP Functional Genomics Resources

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Protein Alignment retinin and CG13040

DIOPT Version :10

Sequence 1:NP_524995.2 Gene:retinin / 53564 FlyBaseID:FBgn0040074 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_648875.1 Gene:CG13040 / 39804 FlyBaseID:FBgn0036608 Length:185 Species:Drosophila melanogaster


Alignment Length:76 Identity:28/76 - (36%)
Similarity:41/76 - (53%) Gaps:10/76 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 VSAGIPVSVPLPLILAARNGLRTVLTIQEPAVAKVG--EVVQHVPTAVSHQTQTVVHDHRRLVTP 158
            |:..:||...:|::...        |...|||..|.  .||:.:|.|||||:.|.||..:.::||
  Fly   107 VAPVVPVIKTVPVVHHQ--------TYVAPAVHHVAAVPVVKALPHAVSHQSHTQVHHQKTIITP 163

  Fly   159 IVAPAVRTTQV 169
            :|||.|:|..|
  Fly   164 VVAPVVKTVAV 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
retininNP_524995.2 Retinin_C 122..>169 CDD:427994 22/48 (46%)
CG13040NP_648875.1 PHA02030 <66..120 CDD:222843 4/12 (33%)

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