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Protein Alignment retinin and CG13059
DIOPT Version :9
Sequence 1: | NP_524995.2 |
Gene: | retinin / 53564 |
FlyBaseID: | FBgn0040074 |
Length: | 191 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_648874.2 |
Gene: | CG13059 / 39803 |
FlyBaseID: | FBgn0036607 |
Length: | 155 |
Species: | Drosophila melanogaster |
Alignment Length: | 103 |
Identity: | 29/103 - (28%) |
Similarity: | 39/103 - (37%) |
Gaps: | 30/103 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 109 ILAARNGL--RTVLTIQEPAVAKVGEVVQHVPTAVSHQTQT-------------VVHDHRRLVTP 158
:.||..|| .|...:|...:||...|.....:|::||:.. ||| ..|
Fly 13 VAAAAPGLIAETHSIVQPAILAKTAYVDTSASSAITHQSNVNLVRKVPVVYSAPVVH-----AAP 72
Fly 159 IV--APAVRTT--------QVIRQQPPLLWSVASDPRV 186
:| ||.|:|. .||...|.|...|:|.|.|
Fly 73 VVHAAPLVKTVIPAAPLVKTVIPAAPVLKTVVSSAPLV 110
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
retinin | NP_524995.2 |
Retinin_C |
122..>169 |
CDD:309599 |
16/69 (23%) |
CG13059 | NP_648874.2 |
rne |
<22..152 |
CDD:236766 |
25/94 (27%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR34931 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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