DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gukh and WAVE2

DIOPT Version :9

Sequence 1:NP_732393.1 Gene:gukh / 53563 FlyBaseID:FBgn0026239 Length:1788 Species:Drosophila melanogaster
Sequence 2:NP_174212.2 Gene:WAVE2 / 839791 AraportID:AT1G29170 Length:1020 Species:Arabidopsis thaliana


Alignment Length:1357 Identity:235/1357 - (17%)
Similarity:415/1357 - (30%) Gaps:505/1357 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 LSNALRQLASLVLIASDIFDDLQRDLQAVGERAGRVQRKIAAVERRVCAYDPKTVTVPESDLLTF 211
            |...||||..|...|::||..:|.::.|...|:.:::.::..:|          .|||..:....
plant    34 LVGVLRQLGDLAEFAAEIFHGIQEEVMATASRSNQLKIRLQHIE----------ATVPPLEKAML 88

  Fly   212 AQRKH-HFETDKSFQQELFTG--ETRPLSVRQLYTEAGKELPVATGATATALASLAHSQSLIPSR 273
            ||..| ||         .:||  |..|            .:|:                      
plant    89 AQTTHIHF---------AYTGGLEWHP------------RIPI---------------------- 110

  Fly   274 SISFNGEVLSSDHEVLQLNGSTDTEDHLLCVSDFGNANRKLRTRIDAEIEIRLPAAIEDLRKWTS 338
                                   |::||: ..|..:      ..:|...|.|.|..:..|.|:  
plant   111 -----------------------TQNHLI-YDDLPH------IIMDPYEECRGPPRLHLLDKF-- 143

  Fly   339 SEALGDVTVTPDCMHHVDTSVSTSLAIGENGILTPALSPSVLSADAVDALY----AQNLSQAADS 399
                 |:.....|:....                             |..|    :.||||.   
plant   144 -----DINGPGSCLKRYS-----------------------------DPTYFRRASSNLSQG--- 171

  Fly   400 SRHNHHTQALIPNDINKDVPLNHRLPSPEEQTKQIALKYPAEVISVNTSGKHFQRMCA-----AR 459
                                 |.:....::..|....|       .::..:...|:.:     ||
plant   172 ---------------------NKKFQKDKKHCKMKKKK-------TSSRSRDMSRLASLANQNAR 208

  Fly   460 KSTSGGYAGGATAGSSSSTSPENAGQTEGNNLDDNVQTVSRRSRSRKVRGKRRNTIAGIDQKEIQ 524
            |:    :|..:.:|.:|||.     .|..::::.........|||.:.|                
plant   209 KT----FASFSFSGQTSSTK-----TTSTSDMEKRYDFQDHHSRSFESR---------------- 248

  Fly   525 DAANGNGESKNASNATSPVAPAQQAETTSSDAKKSKKFGRSKSSDILKKESAALPYDKGKSTLTR 589
               :|:|.::..|.|||.:...::.:            |...||.:          ..|..|:..
plant   249 ---SGSGYNECLSTATSSLKTGERPK------------GVFVSSSL----------TPGSCTIAS 288

  Fly   590 LNS--LKQWGRNRFKFMHRTGELGDQLDTSGCSSQNSSAEKADSHHGSPAG---DNSKRDIDDEC 649
            :.|  ..:...:.|:|....|:..   ..|.|.|.:..||..:|     .|   |.:...::...
plant   289 VLSECETEDAHDNFQFSPSQGQAA---RGSSCVSWDEKAEIVES-----LGLQTDEASEMVEANS 345

  Fly   650 VVHHLVAQKSESRFSHERKPSYSSSEKSISVSSSGQLRGRLQLSSGPMAAAHVKMRETATLNRQR 714
            ||..|           :.||||......:..                    |.|..|    |.:.
plant   346 VVDTL-----------DEKPSYGEGIGGVDF--------------------HSKDNE----NDKS 375

  Fly   715 RNGLHALAGKEEQPHSSSGNWSASSESGRASIGSEITMQPKSSASSTSLNVSSFQPGGAGSGPPS 779
            .:||...||.:|.....:|.              ||..:|:.|...|......|...        
plant   376 ESGLRKRAGIDEVREIKNGR--------------EIVGEPRDSEQETESEGECFVDA-------- 418

  Fly   780 SMLSRRRFLNTSASSSVTSEGTATPELQAEAGAYPGHLDDETSSAYSCDTEGYYTSFHMDSGLRT 844
                    |||..|.|..::|..|.::.:..|     :.||......|:.|....|:.::...|:
plant   419 --------LNTIESESENNQGLQTSQVSSSCG-----VADERLEKSVCEQETEQNSYSVEDSCRS 470

  Fly   845 L--------KEEEPSVMPGTPLQTSLHTSSYSFGS-----QSNQTVLNAESEYELFGRGSTSTTT 896
            :        |.||.:......::  :|..:...||     |.|....|.:...:..|: .|.|.|
plant   471 MDGLMANSFKNEENASSENVSVE--MHQQNLQAGSDINRLQKNDLCANKDMRNDSGGK-DTITFT 532

  Fly   897 SSAGTVCTALMSGAASGPDVPERSSSLGKHSGQSRSQSTSASSSTLERSYSSSTIGSTLERTGTI 961
            ...|...:.:.|   |.|.:         |.|...:|.|.|.||....::...|.|..|      
plant   533 FVPGLENSLVDS---SNPLI---------HHGLQENQETEAESSGDLEAFKIWTNGGLL------ 579

  Fly   962 KRNVKMSPTKAGGEVTEKDDQQD-QDQQQQLEFSESSDLEGVERIERIKQKTALTSKRIPSMCII 1025
                .:.|:|............| :.:::.:.|:|:...:..:.:|....:..|.:..:.:....
plant   580 ----GLKPSKPPVLAMPSSLSPDCKTEERTVGFAEAEKDKADDLVENASHRHVLNNSSLATPGTQ 640

  Fly  1026 TPTTSDD---------DEHQTND-----PNRTLTS------------LTIDVEHGEQDEDEAEQK 1064
            .|.:|:.         :.|:|:.     .::.|||            .|:.....|.||...|::
plant   641 NPGSSNGIVMGIVDQRESHETSSGVFGLSHKFLTSGFRRKDSFAHDRKTVPATIPENDEVTTERR 705

  Fly  1065 TPTNSKDHNLNE--------------------------LKQTPTKALSGMFEKLRVKLVPGKSSP 1103
               ...|.::||                          :...|...|..  .:|::|...|.::.
plant   706 ---RFCDQDINEKTFMDPFRDEAPIDWITSSPPLQHMKISLNPADTLQA--SRLKLKFSDGDNTY 765

  Fly  1104 ---AKNQMQPKPANS--SAVNDDELYDLAGEYVTIADISNNNNNNKNIGRRNTGMGIYYSNDIVS 1163
               :..|:.|:...|  .:.:||:.:..:..|::..|..::|::..|                 |
plant   766 NTFSSFQLLPETGTSLPDSYSDDDTFCRSSPYMSDTDYLSDNHSLSN-----------------S 813

  Fly  1164 KRVEPSTSAVSE-----YVSLNELPQHLRRHAVSSRSAPAAESESCAQQQL-----PVEPAAATS 1218
            :..|.|:.:...     |.|.:| .:|:..:|.:|.....:|| ||....|     |.||.    
plant   814 EPWEESSDSHGRKEQELYDSFHE-SRHVDNNAEASPLGIKSES-SCVAVNLSYLQNPAEPL---- 872

  Fly  1219 QPPPLPLGGRTQGVGDGVPMYAEI----GELSEEKPLASAANRRLR---------PNAEGKLVYD 1270
             |||.|            ||...:    .|..|:|..:......||         |.|:.:|   
plant   873 -PPPFP------------PMQWMVSKTPSEKMEDKTQSLQLQEALRFAFEKHISLPTAKNEL--- 921

  Fly  1271 SDSLKRRKGAHTTFAPGPYVK--------ETESALHSAESAA----------------AAIASSQ 1311
                    .:..|.||.|.:|        |.:.:.::.|:..                ..:.::.
plant   922 --------PSMVTSAPKPEIKAHLKNNVREEKQSANAKETETGDFLQQIRTQQFNLRPVVMTTTS 978

  Fly  1312 DPSAASGAISSTKSAKLLLLTSGGLISGNRKVANVRPIVAKSPLSRNVSEMATYQAT 1368
            ..:|.:..|.:||.:.:|           .|..::|..||    |::..|..|:..|
plant   979 SATATTDPIINTKISAIL-----------EKANSIRQAVA----SKDGDESDTWSDT 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gukhNP_732393.1 NHS <818..>846 CDD:291922 6/35 (17%)
WAVE2NP_174212.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12902
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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