DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gukh and wasf3

DIOPT Version :9

Sequence 1:NP_732393.1 Gene:gukh / 53563 FlyBaseID:FBgn0026239 Length:1788 Species:Drosophila melanogaster
Sequence 2:NP_001072263.1 Gene:wasf3 / 779716 XenbaseID:XB-GENE-1013965 Length:502 Species:Xenopus tropicalis


Alignment Length:548 Identity:103/548 - (18%)
Similarity:169/548 - (30%) Gaps:186/548 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 EFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAVGERAGRVQRKIAAVERRVCAYDPKTVT 202
            |.:.::|.||:..:|||:||...|.|||.:|..:......||..:|.:|..:..:|...|.   |
 Frog    25 ELECVTNSTLAAIIRQLSSLSKHAEDIFGELFNEANNFYIRANSLQDRIDRLAVKVTQLDS---T 86

  Fly   203 VPESDLLTFAQRKHHFETDKSFQQELFTGETRPLSVRQLYTEAGKELPV---------------- 251
            |.|..|.....|| .|::..:..|::.:..:.|..|..:|....:..|:                
 Frog    87 VEEVSLQDINMRK-AFKSSTTQDQQVVSKNSIPKPVIDIYRTCDRPPPLDILSAYRDDKKDSLKF 150

  Fly   252 ----------------------------------ATGATATALA------------SLAHSQSLI 270
                                              ..|.|.....            .:|:.:.|.
 Frog   151 YTDPSYFFDLWKEKMLQDTEDKRKEKRRQKEQKRVDGTTREVKKVRKARNRRQEWNIMAYDKELR 215

  Fly   271 PSRSISFN-GEVLSSDHEVLQLNGSTDTEDHLLCVSDFGNANRKLRTRIDAEIEIRLPAAIEDLR 334
            |...:|.| .:|.||:..:     |.||..|:..::::.                 .||      
 Frog   216 PDNRLSPNVFQVASSEGSL-----SPDTRSHISDITEYS-----------------YPA------ 252

  Fly   335 KWTSSEALGDVTVTP------DCMHHVDTSVSTS----LAIG--ENGILTPALSPSVLSADAVDA 387
              |.:.::....:||      |..||:.||.:..    .|.|  .:|.|:....|.......||.
 Frog   253 --TPNHSIHHHPMTPTYMGSVDPQHHIGTSQTNDHDYRSASGTLRHGTLSRPQQPPPPPPAGVDG 315

  Fly   388 LYAQNLSQAADSSRHNHHTQAL--------------IPNDINKDV-PLNHRLP-SPEEQTKQIAL 436
            .....:..|..|.|.....|.:              ||:.....| ||.|.|| ||..|..  ..
 Frog   316 TSPVPIVSANGSLRRVLPPQMMEYYPTGSPPPPPPVIPSAQTAFVSPLQHSLPSSPAAQMS--GS 378

  Fly   437 KY-------------------------PAEVISVNTSGKHFQRMCAARKSTSGGYAGGATAGSSS 476
            .|                         ||...|:.:|..||.|:..| |...|....|.|:.:.|
 Frog   379 TYAPSPPPGGIINLLASPGPPPPPPGPPAFAQSLASSPMHFARVLEA-KRLDGAQLLGLTSDARS 442

  Fly   477 STSPENAGQTEGNNLDDNVQTVSRRSRSRKVRGKRRNTIAGIDQKEIQDAANGNGESKNASNATS 541
                            |.:..:.                .||..|::|:......:.:...|..:
 Frog   443 ----------------DLLSAIR----------------MGIQLKKVQEQREQEAKREPVGNDVA 475

  Fly   542 PVAPAQQAETTSSDAKKSKKFGRSKSSD 569
            .:. :::.....||::...:|..:..||
 Frog   476 TIL-SRRIAVEYSDSEDESEFDENDWSD 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gukhNP_732393.1 NHS <818..>846 CDD:291922
wasf3NP_001072263.1 WH2_WAVE-3 437..502 CDD:409216 11/97 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12902
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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