DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gukh and Nhsl1

DIOPT Version :9

Sequence 1:NP_732393.1 Gene:gukh / 53563 FlyBaseID:FBgn0026239 Length:1788 Species:Drosophila melanogaster
Sequence 2:XP_017445312.1 Gene:Nhsl1 / 308631 RGDID:1308124 Length:1667 Species:Rattus norvegicus


Alignment Length:1973 Identity:402/1973 - (20%)
Similarity:650/1973 - (32%) Gaps:665/1973 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 PTRHQSQSLPNSRHPSQQRPALGRIASAPQSPTAGSSKVVSGHEFDSISNITLSNALRQLASLVL 159
            |...:|......|.|.:   |.|.:|..|  |...|.:.||.|        ||...|.|||.|..
  Rat     2 PFHQRSVEPARLRRPEE---AAGALAGDP--PLFRSLEQVSSH--------TLVCLLAQLADLSR 53

  Fly   160 IASDIFDDLQRDLQAVGERAGRVQRKIAAVERRVCAYDPKTVTVPESDLLTFAQRKHHFETDKSF 224
            .|.|||.:|:....|:|.|...:.|::.|:.......|.:.|.:|.|:|...::...|:......
  Rat    54 CAGDIFGELEGQAAALGHRTAELHRRLDALHAAAARLDHRRVKIPVSNLDEESRWTVHYTAPWHQ 118

  Fly   225 QQELFTGETRPLSVRQLYTEAGKELPVATGATATALASLAHSQSLIPSRSISFNGEVLSSDHEVL 289
            |:.:|...|||..|..|                       |.|:.:..:|:....:.|..|.   
  Rat   119 QENVFLPSTRPPCVEDL-----------------------HRQAKLNLKSVLRECDKLRRDG--- 157

  Fly   290 QLNGSTDTEDHLLCVSDFGNANRKLRTRIDAEIEIRLPAAIEDLRKWTSSEALGDVTVTPDCMHH 354
                         |.|              ::...:.|.       :.:|.:.||.....|    
  Rat   158 -------------CRS--------------SQYYSQGPT-------FAASSSPGDDYQEED---- 184

  Fly   355 VDTSVSTSLAIGEN----GILTPALSPSVLSADAVDALYAQNLSQAADSSRHNHHTQALIPNDIN 415
            .:|....||:..|.    ||..|. :|:  |.|..|.                 |||    .:..
  Rat   185 AETDRKYSLSSSEEERFIGIRRPK-TPT--SGDFSDL-----------------HTQ----TNWT 225

  Fly   416 KDVPLNHRLPSPEEQTKQIALKYPAEVISVNTSGKHFQRMCAARKSTSGGYAGGATAGSSSSTSP 480
            |.:|    ||:|||:|:|.|....|:|:.:|.:|::|.|..:.|:|.                  
  Rat   226 KSLP----LPTPEEKTRQQAQTVQADVVPINITGENFDRQASLRRSL------------------ 268

  Fly   481 ENAGQTEGNNLDDNVQTVSRRSRSRKVRGKRRNTIAGID---QKEIQDAANGNGESKNASNATSP 542
                          :.|.:...|.:||  |||.||:||.   |||:. :|.|..:..:..:..||
  Rat   269 --------------IYTDTLVRRPKKV--KRRKTISGIPDIIQKELA-SATGQEDDGSTHSLYSP 316

  Fly   543 ------------VAPAQQAETTSSD-------------------------AKKSKKFGRSKSSDI 570
                        .:..|..||..|.                         |:.|...|.|.:..:
  Rat   317 DHYSTLGRLDSYRSTGQCLETRDSGCQTEEVKVIPPSVRRIRAHKGLGIAAQMSHLSGSSGNMSV 381

  Fly   571 LKKESAALPYDKGKSTLTRLNSLKQWG--RNRFKFMHRTGELGDQLDTS------GCSSQNSSAE 627
            | .:||.:.:....:..|..:||.:.|  .:.:....|.|.||...||.      |.|||   ..
  Rat   382 L-SDSAGIVFPSRLNNDTGFHSLPRAGARASTYSLEARMGALGSAEDTDDTFPYRGGSSQ---GP 442

  Fly   628 KADSHHGS---------PAGDNSKRDIDDECVVHHLVAQKSESRFSHERKPS---YSSSEKSI-- 678
            :..:|.|.         |.....:......|||      ...:.:|....|:   .||||..:  
  Rat   443 ENFAHLGGASSTGMLSRPKSQQLRLLESPACVV------SPHAAYSTSVIPNATLLSSSEVIVIH 501

  Fly   679 SVSSSGQLRGRLQ------------------------------------------LSSGPMAAAH 701
            :..|:|||..|:.                                          .|:.|.|.|.
  Rat   502 TAQSAGQLDSRVPGSSSYSKIKPRDHPTPRCSARDERQSPRHHWNEGHIIHSQALASAAPGATAL 566

  Fly   702 VKMRET-ATLNR---QRRNGLHAL-------AGKEEQPHSSSGNWSASSESGRASIGSEITMQPK 755
            :.:|:: .:||.   .|.||..|:       ......|....|. |..|.||....||..:.:.|
  Rat   567 LSLRDSEVSLNAPAINRENGSQAILYHCRSNLAFPAHPPDVDGK-SECSSSGDRGCGSSESWEYK 630

  Fly   756 SSASSTSLNVSSFQPGGAGSGPPSSMLSRRRFLNTSASSSVTSEGTATPELQAEAGAYPGHLDDE 820
            :|::.   ..|..:|                .|.|...|:.||..::....||.       |.::
  Rat   631 ASSNG---RASPLKP----------------HLATPGCSTPTSNMSSCSLDQAS-------LKED 669

  Fly   821 TSSAYSCDTEGYYTSFHMDSGLRTLKEEEPSVMPGTPLQTSLHTSSYSFGSQSNQTVLNAESEYE 885
            ..|.||.|.:|||.:...||     :.|..|.          :..|..||:..:.||       .
  Rat   670 ARSLYSEDHDGYYMTAQGDS-----RHEAGSA----------YGISDGFGNPRHSTV-------N 712

  Fly   886 LFGRGSTSTTTSSAGTVCTALMS------GAASGPDVPERSSSL-------GKHSGQSRSQSTSA 937
            :|. |....:.....|....::|      .|...|..|.|:.||       .:.:||..::|..|
  Rat   713 VFD-GRAQRSQGDQATQQDRILSRNISLKKAKKPPPPPSRTDSLRRIPKKNNQTNGQVLNESLIA 776

  Fly   938 SSSTLERSYSSSTIGSTLERTGTIKRNVKMSPTKAGGEVTEKDDQQDQDQQQQLEFSESSDLEGV 1002
            |   |:.|...|..|   :.:|        ||:::  ..::.::......:.|...||.|.|   
  Rat   777 S---LQHSLQLSLPG---QGSG--------SPSQS--PCSDCEEPWLPRSRSQSIVSEGSSL--- 822

  Fly  1003 ERIERIKQKTALTSKRIPSMCIITPTTSDDDEHQTN--DPNRTLTSLTIDVEHGEQDEDEAEQKT 1065
                     |:.|:..:.|:|.:||:.||....::.  ||    ....||....:.|........
  Rat   823 ---------TSTTTPNVYSLCGLTPSQSDTSSVKSEYADP----WGYYIDYTTLQGDPGNPTGGC 874

  Fly  1066 PTNSKD-------HNLNELKQTPTKALSGMFEKLRVKLVPGKSSPAKNQMQPKPANSSAVNDDEL 1123
            |.:|:.       .::.|..:.|...:.|...|      |..:||.|:|....|::..:...:..
  Rat   875 PASSEAATGNGPVRHIQEGSRAPVPQVPGCSVK------PKITSPEKSQRVTSPSSGYSSQSNTP 933

  Fly  1124 YDLAGEYVTIADISNNNNNNK---NIGRRNTGMGIYYSNDIVSKRVEPSTSAVSEYVS------L 1179
            ..|....|.:..:|..|...|   .:..|.:.:       |.|..:..|::::|...|      :
  Rat   934 TALTPVPVFLKSMSPANGKGKAKPKVPERKSSL-------ISSVSISSSSTSLSSNTSTEGSGTV 991

  Fly  1180 NELPQHLRRHAVSSRSAPAAESESCAQQQLPVEPAAATSQ-----PPPLPLGGRTQG-------V 1232
            .:|..     |::|..||       ....||..|:.:.:.     |||.||...::|       |
  Rat   992 KKLDS-----ALASALAP-------PPPPLPALPSPSLANKSPFLPPPPPLADCSEGSPLPPSPV 1044

  Fly  1233 GDGVPMYAEIGELSEEKPLASAANRRLRPNAEGKLVYDSDSLKRRKGAHTTFAP----------- 1286
            ....|..|.:       |..|..:|.|.|:.                  |.|:|           
  Rat  1045 FPPPPPEALV-------PFCSPTDRCLSPSP------------------TAFSPPLPRCSPPLPA 1084

  Fly  1287 ------------------------GPYVKETESALHSAESAAAAIASSQDPSAASGAISSTKSAK 1327
                                    .|::|.: |...|:..|....|:.::....|..:.:|::.:
  Rat  1085 PPPFLPPSEPPPAPPLDPKFMKENRPFIKNS-SQSESSREALRRPANKEEGCRPSMPLITTEALQ 1148

  Fly  1328 LLLLTSGGLISGNRKVANVRPIVAKSP----------------LSRN-VSEM-ATYQATSYQDQK 1374
            ::.|......||...|....| .|:.|                .||| ::|| :..||.|.....
  Rat  1149 MVQLRPVRKNSGAETVLFSEP-SAQEPRTPTAPQYHLKPSAFLKSRNSINEMESESQAASVTSSL 1212

  Fly  1375 QLLANRTN------------------------PFYETIAAPVAN---------------LMMPSP 1400
            .:.|...:                        |...|...|.::               |::|.|
  Rat  1213 PMPAKSQSQGDHDSAVERGGLQSCSDGAPGPGPSLRTALLPDSSPSRKPPPISKKPKLFLVVPPP 1277

  Fly  1401 S---GKSNSSTGSTATSSSSSASGQSGEEGYQRFSNIYEQVQPAPSTQPQEDATA-----TPFQR 1457
            .   ....:..||.|.|...|.:|..||.|..      ::.:.:|::|....|||     |..:|
  Rat  1278 QRDFTAEPTENGSEAFSGVPSPTGAEGEAGQS------QEEKSSPASQAGSHATAPTSGSTVLER 1336

  Fly  1458 -------------SAPIYWTLQNRRSQ-PRPQPAG--------NV-TCRDDLYATPIRRADRLPR 1499
                         :||:   :|...|. |..:.||        || :|     |:|......||.
  Rat  1337 GTAGSLSPGVVEANAPM---VQPSTSPGPAQEEAGENRVDGERNVKSC-----ASPRGGEAGLPE 1393

  Fly  1500 P-VAAAAATAAE-----GNRSNISPIVPRNRSGAFLT-STPTRSGEGERDSE------NTQLPPM 1551
            | .|..::..|:     ||...::|..||.....|.. ....|...|.:|||      ::..||:
  Rat  1394 PNTAGPSSDTADVSKEGGNDEVLTPTRPRTTEDLFAAIHRSKRKVLGRKDSEDDHTRNHSPSPPV 1458

  Fly  1552 KQPSRNWTDDAPERLNTCADRIGQSKTTLMDFKKLLLAKSAKASPVQRKVSAVELLKKPAQATAT 1616
            .......:..:|:::.:....:.:|.|:..:||.|||.|.:: |....::||.|:||      :|
  Rat  1459 TPTGAAPSLASPKQVGSIQRSLKKSSTSSDNFKALLLKKGSR-SDTSARMSAAEMLK------ST 1516

  Fly  1617 PPVVKPSGPGQKVASAGSKPTINTSLKLLDLSGSPKTFA---NRR-----------MLRQGQFGS 1667
            .|         :...:.|:|:       .::..||.:|:   |||           |.|...|..
  Rat  1517 DP---------RFQRSRSEPS-------PEVPDSPSSFSPNKNRRAPEEWAKNEGLMPRSLSFSG 1565

  Fly  1668 P--SKTFAP--------KMR-----GPVNMVAAAAAPPRTDIMSTTIPEANSEEDHSNTSGGSRA 1717
            |  |::..|        .||     .|:.:::.....|..       |..|......:|:.|...
  Rat  1566 PRYSRSRTPPSAASSRYSMRNRIQSSPMTVISEGEGEPAE-------PADNKVRRTLDTTRGCSL 1623

  Fly  1718 SSEAGETV----------PSSFD 1730
            ...||:..          |:|.|
  Rat  1624 DRLAGQETDRGSPLCSEEPASVD 1646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gukhNP_732393.1 NHS <818..>846 CDD:291922 9/27 (33%)
Nhsl1XP_017445312.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 60 1.000 Inparanoid score I5311
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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