DRSC/TRiP Functional Genomics Resources

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Protein Alignment gukh and RGD1561552

DIOPT Version :9

Sequence 1:NP_732393.1 Gene:gukh / 53563 FlyBaseID:FBgn0026239 Length:1788 Species:Drosophila melanogaster
Sequence 2:NP_001119743.1 Gene:RGD1561552 / 302367 RGDID:1561552 Length:634 Species:Rattus norvegicus


Alignment Length:662 Identity:130/662 - (19%)
Similarity:229/662 - (34%) Gaps:167/662 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1036 QTNDPNRTLTSLTIDVEHGEQDEDEAEQKTPTNSKDHNL----NELKQTPTKALSGMFEKLRVKL 1096
            |.||    |...|.|| .|:.|::..:..........|:    |.:.:.|...||....|.|   
  Rat    39 QVND----LDKFTEDV-LGKLDKEIHDLSFKLKILQENIIQLTNAIHKIPNDILSMQLWKSR--- 95

  Fly  1097 VPGKSSPAKNQMQPKPANSSAVNDDELYDLAGEYVTIADISNNNNNNKNIGRRNTGMGIYYSNDI 1161
                          |..:...:...::|......:.|.:     .||.||......:..||.||:
  Rat    96 --------------KTFSKITIETQQVYSCTSLPIKIFE-----RNNANIRIPLLTVPEYYQNDM 141

  Fly  1162 VSKRVEPSTSA-----------VSEYVSLNELPQHLRRHAVSSRSAPAAESESCAQ-----QQLP 1210
            ..   .||::.           :.:.||:|:.....::|..:.....|.:.::..|     :.:|
  Rat   142 ED---SPSSNGLFHPCLYCSKLLKDNVSVNKQLASEKKHTQNQNLTHAGDFKNVLQCHLLKKHIP 203

  Fly  1211 VE--PAAATSQ-----------------PPPLPLGGRTQGV-------GDGVPMYAEIGELSEEK 1249
            |:  ||:.:..                 ||.   ..:.||.       .:...::..||.:|..:
  Rat   204 VDHIPASGSEVSHSYLDQYGGGSSFYIFPPN---RNKHQGTSAANILPSEQEQLHYHIGCMSNSR 265

  Fly  1250 PLASAANRRLRPNAEGKLVYDSDSLKRRKGAH-------TTFAPGPYVKETESALHSAESAAAAI 1307
            |      |.|....:|.:|..    :||...|       ...||......::..:|        :
  Rat   266 P------RVLYGTGKGDVVVK----QRRVLTHYKSNVFVNPLAPKAPPLPSDWLIH--------L 312

  Fly  1308 ASSQDPSAASGAISSTKSAKLLLLTSGGLISGNRKVANVRPIVAKSPLSRNVSEMATYQATSYQ- 1371
            .||:.|| |||.|||..       ||...:.|..|......:.:...:...|.......|||.. 
  Rat   313 ISSKKPS-ASGVISSRG-------TSSFFVLGKTKTLPSACLKSNPNIDLTVPPEVEVTATSESL 369

  Fly  1372 DQKQLLANRTNPFYETIAAPVANLMMPSPSGKSNSSTGSTATSSSSSASGQSGEEGYQRFSNIYE 1436
            ::.:|.....:|  :.:...:..|:.||.....|.|..|..|...|                :.|
  Rat   370 ERYELKPGGLSP--QDMDQKIPLLLYPSVIPLRNQSWDSVVTLIDS----------------LVE 416

  Fly  1437 QVQPAPSTQPQEDATATPFQRSAPIYWTLQNRRSQPRPQ-PAGNVTCRDDLYATPIRRADRLPRP 1500
            :.||..|:.|:...:   ..:|...:.:|        || |..| |.|  .::..:.::.|:||.
  Rat   417 KPQPIKSSFPKSPRS---LSKSKYAHGSL--------PQHPVAN-TSR--TFSAQLPKSYRVPRH 467

  Fly  1501 VAAAAATAAEGNRSNISPIVPRNRSGAFLTSTPTRSGEGERDSENTQL-PPMKQPSRNWTDDAPE 1564
            ..:.:|:.:...::: |.:||: ||.:.||.................| ||..:||:........
  Rat   468 SFSVSASPSPKPQTS-SNVVPK-RSVSHLTKLIEAQSRSPVTYPKRHLHPPQAKPSKQLNKSNLT 530

  Fly  1565 RLNTCADRIGQSKTTLMDFKKLLLAK------SAKAS--------PVQRKV--SAVELLKKPAQA 1613
            :::|....:...|::..:.:  .|||      ||.||        |:..|.  :.:|.::|..:.
  Rat   531 KVSTLQSSLSSMKSSASNHR--ALAKRHYRIESAYASILQNTSILPIMTKARKALMEAIRKGIKL 593

  Fly  1614 TATPPVVKPSGP 1625
            ..|.|..:...|
  Rat   594 RKTRPRAESDDP 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gukhNP_732393.1 NHS <818..>846 CDD:291922
RGD1561552NP_001119743.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12902
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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