DRSC/TRiP Functional Genomics Resources

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Protein Alignment gukh and Nhsl1

DIOPT Version :9

Sequence 1:NP_732393.1 Gene:gukh / 53563 FlyBaseID:FBgn0026239 Length:1788 Species:Drosophila melanogaster
Sequence 2:XP_036011625.1 Gene:Nhsl1 / 215819 MGIID:106390 Length:1679 Species:Mus musculus


Alignment Length:1675 Identity:336/1675 - (20%)
Similarity:540/1675 - (32%) Gaps:583/1675 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 HTQALIPNDINKDVPLNHRLPSPEEQTKQIALKYPAEVISVNTSGKHFQRMCAARKSTSGGYAGG 469
            |||    .:..|.:|    ||:|||:|:|.|....|:|:.:|.:|::|.|..:.|:|.       
Mouse   237 HTQ----TNWTKSLP----LPTPEEKTRQQAQTVQADVVPINITGENFDRQASLRRSL------- 286

  Fly   470 ATAGSSSSTSPENAGQTEGNNLDDNVQTVSRRSRSRKVRGKRRNTIAGID---QKEIQDAANGNG 531
                                     :.|.:...|.:||  |||.||:||.   |||:   |:..|
Mouse   287 -------------------------IYTDTLVRRPKKV--KRRKTISGIPDIIQKEL---ASATG 321

  Fly   532 ESKNASNATSPVAP---------------AQQAETTSSD-------------------------A 556
            :..:.| |.|...|               .|..||..:.                         |
Mouse   322 QDDDGS-AHSLYVPDHYSTLGRLDSYRSTGQCLETRDTSCQTEDVKVIPPSMRRIRAHKGVGVAA 385

  Fly   557 KKSKKFGRSKSSDILKKESAALPYDKGKSTLTRLNSLKQWG--RNRFKFMHRTGELGDQLDTSGC 619
            :.|...|.|.:..:| .:||.:.:....|..|..:||.:.|  .:.:....|.|.||...||...
Mouse   386 QMSHLSGSSGNMSVL-SDSAGVVFPSRLSNDTGFHSLPRTGPRASTYSLEGRMGALGSTEDTDDT 449

  Fly   620 SSQNSSAEKADSHHGSPAGDNSK-----------RDIDD-ECVV------------HHLVAQKSE 660
            |.....:.:...:.....|.:|.           |.::. .|||            :..:...||
Mouse   450 SPYQGGSLQGHENFAHLGGASSTGMLSRPKSQQLRFLESPACVVSPHAAYSTSVIPNATLLSSSE 514

  Fly   661 SRFSH---------ERKPSYSSSEK---------SISVSSSGQ-----------LRGRLQLSSGP 696
            ....|         .|.|..||..|         ..||....|           :..|...||.|
Mouse   515 VIVIHTAQSAGQLDSRTPGSSSYSKIKPRDRPTPRCSVKDDHQSPRHHWNEGHLIHSRALASSVP 579

  Fly   697 MAAAHVKMRET-ATLN--RQRRNGLHAL-------AGKEEQPHSSSGNWSASSESGRASIGSEIT 751
            .|...:.:.:: .:||  ..|.||..|:       ....:.|....|. |..|.||....||.  
Mouse   580 GATTLLSLHDSEVSLNAPANRENGSQAILYHCRNNPSFPDHPSDVDGK-SECSYSGDRGCGSS-- 641

  Fly   752 MQPKSSASSTSLNVSSFQPGGA--GSGPPSSMLSRRRFLNTSASSSVTSEGTATPELQAEAGAYP 814
             :|....:|::...|..:|..|  |...|:|.:|       |.|...||                
Mouse   642 -EPWEYKTSSNGRASPLKPHLATPGCSTPTSNVS-------SCSLDQTS---------------- 682

  Fly   815 GHLDDETSSAYSCDTEGYYTSFHMDSGLRTLKEEEPSVMPGTPLQTSLHT-SSYSFGSQSNQTVL 878
              |..:|.|..|.|.:||||:.|....|.||.:.     .|.|..:.::. ...:..||.:|   
Mouse   683 --LKGDTRSLCSEDHDGYYTTTHEAGNLYTLSDG-----LGNPRHSMVNVFDGRAQRSQGDQ--- 737

  Fly   879 NAESEYELFGRGSTSTTTSSAGTVCTALMSGAASGPDVPERSSSL-------GKHSGQSRSQSTS 936
             |..:.::..|..:              :..|...|..|.|:.||       .:.:||..::|..
Mouse   738 -AAHQDKILSRNIS--------------LKKAKKPPLPPSRTDSLRRIPKKNNQTNGQVLNESLI 787

  Fly   937 ASSSTLERSYSSSTIGSTLERTGTIKRNVKMSPTKAGGEVTEKDDQQDQDQ------QQQLEFSE 995
            ||                      ::.::::|....||....:....|.::      :.|...||
Mouse   788 AS----------------------LQHSLQLSLPGKGGSSPSQSPCSDFEEPWLPRSRSQSIVSE 830

  Fly   996 SSDLEGVERIERIKQKTALTSKRIPSMCIITPTTSDDD--EHQTNDPNRTLTSLTIDVEHGEQDE 1058
            .|.|            |:.|:..:.|:|.:||:.||..  :.:..||    ....||....::|.
Mouse   831 GSSL------------TSTTTPNVYSLCGVTPSQSDTSSVKSEYTDP----WGYYIDYTSLQEDP 879

  Fly  1059 DEAEQKTPTNSKDHNLNELKQTPTKALSG------MFEKLRVKL--VPGKS------SPAKNQMQ 1109
            .     .||.....|        |:|.:|      :.|..||.:  |||.|      ||.|:|..
Mouse   880 G-----NPTGGCSAN--------TEAATGNGPVRHIQEGSRVPVPQVPGCSVRPKIASPEKSQRV 931

  Fly  1110 PKPANSSAVNDDELYDLAGEYVTIADISNNNNNNK---NIGRRNTGMGIYYSNDIVSKRVEPSTS 1171
            ..|::..:...:....|....|.:..:|..|...|   .:..|.:.:       |.|..:..|::
Mouse   932 TSPSSGYSSQSNTPTALTPVPVFLKSMSPANGKGKAKPKVPERKSSL-------ISSMSISSSST 989

  Fly  1172 AVSEYVSLN---------------------ELPQHLRRHAVSSRS-------------------- 1195
            ::|...|..                     .||. |....::.:|                    
Mouse   990 SLSSNTSTEGSGTMKKLDTTLASALAPPPPPLPP-LPSPCLADKSPFLPPPPPLADCSEGSPLPP 1053

  Fly  1196 -------------------------APAAESESCAQQQLPV---EPAAATSQPPPLPLGGRTQGV 1232
                                     :|.|.|.|..:...||   .|...:|:|||.|        
Mouse  1054 SPMFPPPPPEALVPFCSPTDGCLSPSPTAVSPSLPRSLPPVPAPPPFLPSSEPPPAP-------- 1110

  Fly  1233 GDGVPMYAEIGELSEEKP--------------LASAANR-------------------RLRP--- 1261
                |:..::  :.|.:|              |...||:                   :|||   
Mouse  1111 ----PLDPKL--MKENRPFFKNSSQSESSREALRRPANKEEGCRPPMPLITTEALQMVQLRPVRK 1169

  Fly  1262 -NAEGKLVYDSDSLKRRKGAHTTFAPGPYVK--------------ETESALHSAESAAAAIASSQ 1311
             :..|.:::...|.:.::   |..||..::|              |:||...|..|:....|.||
Mouse  1170 NSGAGAVLFSEPSAQEQR---TPTAPQYHLKPSAFLKSRNSINEMESESQAASVTSSLPMPAKSQ 1231

  Fly  1312 D-------------PSAASGAISSTKSAKLLLLTSGGLISGNRKVANVRPIVAKSPL-------- 1355
            .             ||.:.||.....|.:..||...   |.:||    .|.::|.|.        
Mouse  1232 SQGDHDSAVERGGLPSCSDGAPGPGPSLRTTLLPDS---SPSRK----PPPISKKPKLFLVVPPP 1289

  Fly  1356 --------SRNVSE---------MATYQATSYQDQKQLLANRTNPFYETIAAPVANLMMPSPSGK 1403
                    :.|.||         .|..:|...|::|...|:|... :.|...|.:..:.|..:|.
Mouse  1290 QRDFTAEPTENGSEAFPGVPSPTRAEGEAVRSQEEKSSPASRAGS-HATAPTPGSPALEPGTAGS 1353

  Fly  1404 SNSSTGSTATSSSSSASGQSGEEGYQRFSNIYEQVQPAPS---TQPQEDATATPFQRSAPIYWTL 1465
            .:||...                     :|: ..|||..|   ||.:....:...:|:|....:.
Mouse  1354 LSSSIVE---------------------ANV-PMVQPNTSPGPTQEESGENSVDGERNAKSCLSQ 1396

  Fly  1466 QNRRSQPRPQPAGNVTCRDDLYATPIRRADRLPRPVAAAAA------TAAEGNRSNISPIVPRNR 1524
            |.|.       ||                  |..|..||::      :..||:...::|..||..
Mouse  1397 QGRE-------AG------------------LLEPNTAASSSDPVDVSKEEGSDEVLTPTKPRTT 1436

  Fly  1525 SGAFLT-STPTRSGEGERDSE------NTQLPPMKQPSRNWTDDAPERLNTCADRIGQSKTTLMD 1582
            ...|.. ....|...|.:|||      ::..||:...|......:|:::.:....|.:|.|:..:
Mouse  1437 EDLFAAIHRSKRKVLGRKDSEDDHTRNHSPSPPVTPTSAAPNLASPKQVGSIQRSIKKSTTSSDN 1501

  Fly  1583 FKKLLLAKSAKASPVQRKVSAVELLKKP----AQATATPPVVKPSGPG----QKVASAGSKPTIN 1639
            ||.|||.|.:: |....::||.|:||..    .::.:.|....|..|.    .|...|..:...|
Mouse  1502 FKALLLKKGSR-SDTSARMSAAEMLKSTDPRFQRSRSEPSADSPDSPSSCSPNKNRRAQEEWAKN 1565

  Fly  1640 TSL--KLLDLSG-------SPKTFANRR-------------MLRQGQFGSPSKTFAPKMRGPVNM 1682
            ..|  :.|..||       :|.:.|:.|             ::.:|: |.|::....|.|..::.
Mouse  1566 EGLMPRSLSFSGPRYSRSRTPPSAASSRYSMRNRIQSSPMTVISEGE-GEPAEPADNKARRALDA 1629

  Fly  1683 VAAAAAPPRT----DIMSTTIPEANSEEDHSNTSGGSRASSEAGETVPSS 1728
            ....:....|    |..|....|..:..|....:.|:..|.:.|.|...|
Mouse  1630 TRVCSLDRLTGQEMDQASLLCSEEPASVDGIGRAEGNGPSEQCGGTEQKS 1679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gukhNP_732393.1 NHS <818..>846 CDD:291922 11/27 (41%)
Nhsl1XP_036011625.1 NHS 350..975 CDD:405865 147/728 (20%)
PRK11901 <1326..>1515 CDD:237015 50/237 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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