DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gukh and Wmp

DIOPT Version :9

Sequence 1:NP_732393.1 Gene:gukh / 53563 FlyBaseID:FBgn0026239 Length:1788 Species:Drosophila melanogaster
Sequence 2:NP_001028424.1 Gene:Wmp / 213450 MGIID:2685578 Length:516 Species:Mus musculus


Alignment Length:507 Identity:102/507 - (20%)
Similarity:168/507 - (33%) Gaps:124/507 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   607 TGELGDQLDTSGC----------------------SSQNSSAEKADSHHGSPAGDNSK----RDI 645
            :|.|.:.|:.|.|                      ..|.|..:...:.:.:.|||...    :.:
Mouse    15 SGYLKNYLEDSNCYCDSFHSCLYYSKCFNNNVSMNKGQTSEKKHIQNQNINHAGDFKNVLQCQLL 79

  Fly   646 DDECVVHHLVAQKSESRFSHERKPSYSSSEKS-ISVSSSGQLRGRLQLSSGPMAAAH-------- 701
            .:...|.|:.|..:|.  ||.....|.....| |..|:..:.:||...:..|....|        
Mouse    80 KEHIPVDHIPASGNEE--SHSYLDQYDGGSSSYIFQSNRNKCQGRYAANDLPDVQDHFYHCIGHV 142

  Fly   702 ---------------VKMRETATLNRQRRNGLHALAGKEEQPHSSSGNWSASSESGRASIGSEIT 751
                           |.:|:..||...:.|........|..|..|  :|.....|.:......:.
Mouse   143 SKSQPRVLYGIGKGGVVLRQGPTLAHYKSNVFVNPLAPEAPPLPS--DWLIQLISSKRPSAHGVV 205

  Fly   752 MQPKSSASSTSL---NVSSFQPGGAGSGPPSSMLSRRRFLNTSASSSVTSEGTATPELQAEAGAY 813
            ...:|..:|:.|   ..::..|..:.|.|...::     :......:.|||.....|||.:.|..
Mouse   206 SSRRSRGTSSLLVLERTTTLPPASSKSNPNIDLI-----MLPEVEFTATSESLEYYELQKQGGLN 265

  Fly   814 PGHLDDETS-----SAYSCDTEGYYTSFHM-DSGLRTLKEEEPSVMPGTPLQTSLHTSSYSFGSQ 872
            |..|:.|.:     |......:.:.:...: ||.|....:...|..|.:|...|...|.:  ||.
Mouse   266 PQGLNQEIALLVHPSVIPLKNQSWDSIVDLIDSSLVLNTQSIKSSFPKSPRSPSKSNSEH--GSL 328

  Fly   873 SNQTVLNAESEYELFGRGSTSTTTSSAGTVCTALMSGAASGP-------DVPERSSS-------- 922
            |...|.|.       .|.||:.:..|....|......|:..|       .:||.|.|        
Mouse   329 SPNPVANT-------SRISTTQSPRSYRVPCCFSSVPASQSPKPQITLNPLPEHSVSHLIKLIEA 386

  Fly   923 -------LGK---HSGQSR-SQSTSASSSTLERSYSSSTIGSTLERTGTIKR--------NVKMS 968
                   |.|   |..|:: |..|.:..|||:.|.||.....:.:|...|::        ::..:
Mouse   387 QSKLPMTLSKRQLHPPQAKLSSFTLSEVSTLQSSLSSMKSSISGQRALKIRQYTIESAYASIMQT 451

  Fly   969 P------TKAGGEVTE---KDDQQDQDQQQQLEFSESSDLEGVERIERIKQK 1011
            |      ||...|:.|   |..:..:.|.:    .|:.|||....:.|:::|
Mouse   452 PSSLPIMTKPRNELMEEIRKGIKLHKTQPR----PENEDLENGAEMIRVRRK 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gukhNP_732393.1 NHS <818..>846 CDD:291922 5/33 (15%)
WmpNP_001028424.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12902
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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