DRSC/TRiP Functional Genomics Resources

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Protein Alignment gukh and wve-1

DIOPT Version :9

Sequence 1:NP_732393.1 Gene:gukh / 53563 FlyBaseID:FBgn0026239 Length:1788 Species:Drosophila melanogaster
Sequence 2:NP_001379196.1 Gene:wve-1 / 187639 WormBaseID:WBGene00006958 Length:468 Species:Caenorhabditis elegans


Alignment Length:499 Identity:97/499 - (19%)
Similarity:182/499 - (36%) Gaps:115/499 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LGRIASAPQSPTAGS-SKVVSGHEFDSISNITLSNALRQLASLVLIASDIFDDLQRDLQAVGERA 179
            |.:.|.:|.:.:.|: ...:...|....:|.|::|.:|||:||...|.:||.::..|...:..::
 Worm     3 LTKRAVSPVNLSRGTIPSTIHRDELQCTANGTIANLVRQLSSLSKHAENIFGEIYHDAMIINHKS 67

  Fly   180 GRVQRKIAAVERRVCAYDPKTVTVPESDLLTFAQRKHHFETDKSFQQELFTGETRPLSVRQLYTE 244
            ..:|::|..:.::|...|..:    :...|..|..:..|::.....|.:....|.|.::.::|.:
 Worm    68 NTLQQRIDRLHKKVEDLDSNS----DQATLNEANMRKAFKSSMLVDQHILDRSTLPTALTEIYAK 128

  Fly   245 AGKELPVATGATATALASLAHSQSLIPSRSISFN-------GEVLSSDHEVLQLN-GSTDTEDH- 300
            .  :.|....|......|...:.||..:.|..|:       .||......|...| ||...:.. 
 Worm   129 C--DPPPDLDALNPYRDSEIPALSLYTNPSFFFDLWKKETLKEVAERPRRVKSPNDGSKSPKKRR 191

  Fly   301 ---------LLCVSDFGNANRKLR-TRIDAEIEI-RLPAAIEDLRKWTSSEALG----------D 344
                     ....:|..:.||::. :||:.:.|: ..|      .::.:.:|||          .
 Worm   192 KQPGQGPLGTTAYNDMQHRNRQISGSRINQQNEVFSFP------EEYQAPQALGLQLNFKNQHPS 250

  Fly   345 VTVTPDCM---HHVDTSVSTS--------LAIGENGILTPALSPSVLSADAVDALYAQNLSQAAD 398
            ..|.|..|   ||...:|..|        .|.|...:..|..:|..::   :|.|...::|    
 Worm   251 NMVAPIGMTMHHHPQQNVHPSQQRGGAPAAARGSPNVKRPTEAPPPVN---LDHLPPPDMS---- 308

  Fly   399 SSRHNHHTQALIPNDINKDVP-----------LNHRLPSPEEQTKQIALKY------------PA 440
                     .|..:|.:.|:|           :.|:||:....|.|.....            |.
 Worm   309 ---------ILSIDDDDDDLPPPPPPLLMNTSIVHQLPAEAPSTIQFVEPSAAPPTNIPPPPPPP 364

  Fly   441 EVISVNTSGKHFQRMCAARKSTSGGYAGGATAGSSSSTSPENAGQTEGNNLDDNVQTVSRRSRSR 505
            ..:.::::...|  ...|.|.:    |.|..||::|..:|:   |.:..:  |.:..:....:.:
 Worm   365 PPMVISSAAASF--AAPAPKPS----ADGEAAGTNSPVAPK---QPDARS--DLLAQIQSGIKLK 418

  Fly   506 KVR----------GKRRNTIAGIDQKEIQDAANGNGESKNASNA 539
            ||:          ....|.:|.| .|...|...||.:|.:...|
 Worm   419 KVQRAEAEAAENAALEANNVAAI-LKRRMDQVMGNDDSSSEEGA 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gukhNP_732393.1 NHS <818..>846 CDD:291922
wve-1NP_001379196.1 WH2_WAVE 400..>422 CDD:409200 4/23 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12902
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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