DRSC/TRiP Functional Genomics Resources

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Protein Alignment tara and Cdca4

DIOPT Version :10

Sequence 1:NP_524994.2 Gene:tara / 53562 FlyBaseID:FBgn0040071 Length:916 Species:Drosophila melanogaster
Sequence 2:NP_082299.1 Gene:Cdca4 / 71963 MGIID:1919213 Length:237 Species:Mus musculus


Alignment Length:233 Identity:54/233 - (23%)
Similarity:89/233 - (38%) Gaps:58/233 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 YKDTRLKIRNLSMFKLSRFRQVSEQSLYRSVLICNTLKRIDREIEAEAKELHQAAQQHHQQAAAA 500
            |...|..:.::|:.||.....:.|.:|.|||||.||:::|..|:..:. ..|..|.|:..:|...
Mouse    26 YSLQRQSLLDMSLVKLQLCHMLVEPNLCRSVLIANTVRQIQEEMSQDG-VWHGMAPQNVDRAPVE 89

  Fly   501 AAAAAAAAAQ----AAQYHPAYQQQQQQQQSPPAPLHPHTQQQMDYAPVLNCA--------RLAN 553
            ...:.....:    |.:.|||.:.:.       |||    |..:...|::..|        .|..
Mouse    90 RLVSTEILCRTVRGAEEEHPAPELED-------APL----QNSVSELPIVGSAPGQRNPQSSLWE 143

  Fly   554 MDHYQQL--SFQPQHQQQQQPSQPHSYHERLDSQPAYRGAAAGAGSFATQPSNCDTS-------- 608
            ||..|:.  |||....|         ..|.|:::        .:.|.....|:.|:|        
Mouse   144 MDSPQENRGSFQKSLDQ---------IFETLENK--------NSSSVEELFSDVDSSYYDLDTVL 191

  Fly   609 ----AGASSSNTSGNSNNSSAT---AASSNSSLHPYDH 639
                :|..||..:|....::||   :::..|.|...||
Mouse   192 TGMMSGTKSSLCNGLEGFAAATPPPSSTCKSDLAELDH 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
taraNP_524994.2 SERTA 443..478 CDD:461806 13/34 (38%)
Cdca4NP_082299.1 SERTA 33..68 CDD:461806 13/34 (38%)
GET2 <103..>216 CDD:400847 30/140 (21%)

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