DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmet and KIP3

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_011299.1 Gene:KIP3 / 852655 SGDID:S000003184 Length:805 Species:Saccharomyces cerevisiae


Alignment Length:634 Identity:180/634 - (28%)
Similarity:281/634 - (44%) Gaps:122/634 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 YVFDYVFDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAK 108
            :|||.:|||.:|...|:......::.:.:.|||.|:||||.|..|||||:.|....||::.||.:
Yeast   153 FVFDKLFDETSSQARVYKETTSPLLDSVLDGFNSTVFAYGATGCGKTYTVSGTPSQPGIIFLAME 217

  Fly   109 EIFQQISS-ETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKI---HESGNGIVNVNCEECIITSE 169
            |:|.:|:. :.|:||.:.:.|:|||||:|.|||..:....::   .::.|.|...|.......:.
Yeast   218 ELFNKITDLKDEKDFEISLSYLEIYNERIRDLLKPETPSKRLVIREDTQNHIKVANLSYHHPNTV 282

  Fly   170 VDLLRLLCLGNKERTVGETNMNERSSRSHAIFKI-IIESRK-----SDHSDDDAVIQSVLNLVDL 228
            .|::.|:..||..||...|..||.||||||:.:| |:::.|     |.|:      .:.|:::||
Yeast   283 EDVMDLVVQGNINRTTSPTEANEVSSRSHAVLQIHIMQTNKLVDLTSQHT------FATLSIIDL 341

  Fly   229 AGSERADQTGARGARLKEGGHINKSLLFLSNVIKSLSENADNRFTN--YRDSKLTRILQASLGGN 291
            ||||||..|..||.||.||.:||:|||.|.|.|.:|..|..:|..:  ||||||||:|:.|||||
Yeast   342 AGSERAAATRNRGIRLHEGANINRSLLALGNCINALCLNDGSRSCHIPYRDSKLTRLLKFSLGGN 406

  Fly   292 AFTSIICTIKPSI--MEESQSTLSFATRAKKIRIK---------PQVNEMVSDATMMKR-----L 340
            ..|.:|..|.||.  .:|:.:||.:|.|||:|:.|         ..|...:...|..||     .
Yeast   407 CKTVMIVCISPSSSHYDETLNTLKYANRAKEIKTKIIRNQQSLSRHVGSYLKMITEQKRQIEELR 471

  Fly   341 EREIKVL------------KDKLAEEERKNENQQKVEHLE-------------------RQIKHD 374
            |||.|::            |.:||..|..|..||....:|                   :.:|.:
Yeast   472 EREEKMISLKLTKYKLNKEKIQLAINECVNRVQQTYAGVETYQVAKTLKSLILCKRRFLQMVKLE 536

  Fly   375 MHKIIC--GHSLSDKGQQKRRRTWCPTASGS-HLELAETGTTEDRIDQFPKVSHLPKPVFFHTSN 436
            :..:|.  ....|...:.:...:.|...||. :.::.|.....|..|....|.|....:..:...
Yeast   537 VDNLILLFEREESTAAEMQPVISNCRMISGQLYNKIHELEMKFDETDTLSSVIHQVHSIDLNKLR 601

  Fly   437 AGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDFGSPRPDVL--KPMLTIRQLPDLPLTP 499
            ..:.||.....:.:...|      |.|||           ..|.::|  ..::|.:.:.|..|..
Yeast   602 EMEDWDETYDLVYLESCL------NQISE-----------LQRNEILVNSSIMTEKLMSDPGLNS 649

  Fly   500 KGPL-------TTDKIKKEIQDL----QMFTSLEKHFEVECE------EVQGLKEKLAEVTAQRD 547
            :...       .|..|:..||||    :.|.|..:.|....:      .:..:....|::....:
Yeast   650 RFKFLSKWLMNRTPNIESIIQDLVHIDEEFESFARTFIANPDSNFTNTNINIINTTAADLAVPAE 714

  Fly   548 NLEQESLAEK---------------ERYDALEKEVTSLRADNEAANSKI 581
            .|::::.::|               |....||.|   |..|.:|..|::
Yeast   715 TLQRQNFSQKKVKWTSPDLSPSPMIEPQPELEPE---LHQDQDAIASEV 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 121/306 (40%)
Motor_domain 8..321 CDD:277568 119/290 (41%)
Smc <680..1449 CDD:224117
TMPIT 779..>867 CDD:285135
Smc 1042..1910 CDD:224117
KIP3NP_011299.1 KISc_KIP3_like 82..438 CDD:276821 119/290 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0242
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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