DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and KIP1

DIOPT Version :10

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_009490.1 Gene:KIP1 / 852216 SGDID:S000000159 Length:1111 Species:Saccharomyces cerevisiae


Alignment Length:1198 Identity:278/1198 - (23%)
Similarity:501/1198 - (41%) Gaps:291/1198 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAKNASSIQVCIKVRPCEPGLTSLWQVKERRSIHLA-------------------DSHAEPYVFD 47
            :|.:.|:|.|.::.|.     .:..:::|:.|:.::                   .|..:.|.||
Yeast    46 AATSDSNIHVYVRCRS-----RNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFD 105

  Fly    48 YVFDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGD---------------E 97
            .||...:..:.||:..||:.:...:.|:|.||||||||.:||||||.||               .
Yeast   106 QVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLG 170

  Fly    98 QNPGVMVLAAKEIFQQISSETERDFLLRVGYIEIYNEKIYDLLNKKNQD----------LKIHES 152
            ::.|::.....::|:::|| ..:::.:::.::|:|||.:.|||:....|          ::|.::
Yeast   171 EHAGIIPRVLVDLFKELSS-LNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDN 234

  Fly   153 GN---GIVNVNCEECIITSEVDLLRLLCLGNKERTVGETNMNERSSRSHAIFKI---IIESRKSD 211
            .|   .|:....:|..|.|..:.|.||..|:.:|.|..|..|:.|||||.:|.|   |:|....|
Yeast   235 NNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKD 299

  Fly   212 HSDDDAVIQ-SVLNLVDLAGSERADQTGARGARLKEGGHINKSLLFLSNVIKSLSENADNRFTNY 275
            |..:...:: ..||||||||||..:::||...|.:|.|.||||||.|..||.:|.:::::  ..|
Yeast   300 HGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNH--IPY 362

  Fly   276 RDSKLTRILQASLGGNAFTSIICTIKPS--IMEESQSTLSFATRAKKIRIKPQVNEMVSDATMMK 338
            |:|||||:||.||||...|.||.||.|:  .|||:.|||.:|||||.|:..||||:.:|..|.:|
Yeast   363 RESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLK 427

  Fly   339 RLEREIKVLKDKLAEEERKNENQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGS 403
            ...:||    :||..:.:.:.|:|.:...:.|:  |:::                       |.|
Yeast   428 DYIQEI----EKLRNDLKNSRNKQGIFITQDQL--DLYE-----------------------SNS 463

  Fly   404 HLELAETGTTEDRID-QFPKVSHLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEF 467
            .|           || |..|:.:|.:.:        |::..     |.|..|||.....|..|:.
Yeast   464 IL-----------IDEQNLKIHNLREQI--------KKFKE-----NYLNQLDINNLLQSEKEKL 504

  Fly   468 LPA---ECIDFGSPRPDV-------LKPMLTIRQLPDLPL--TPKGPLTTDKIKKEI--QDLQMF 518
            :..   ..:||.:...::       |:.|..:.|..|..|  :.|...|...::.:|  |.||..
Yeast   505 IAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTL 569

  Fly   519 TSLE---KHFEVECEEV-QGLKEKLAEVTAQRDNLEQESLAEKERYDALEKEVTSLRADNEAANS 579
            .:|:   .::..:|.|| :|:.|:|..      |:.    ..|.::|:..|.:.     |...|.
Yeast   570 NTLQGSLNNYNSKCSEVIKGVTEELTR------NVN----THKAKHDSTLKSLL-----NITTNL 619

  Fly   580 KISELEEKLSTLKQTMRIMEVE---------NQVAVGLEFEFEAHKKSSKLRVDDLLSALLEKES 635
            .::::.|.:.::..::.|.:.:         |::       :::|::..|...:|:.|.|   :|
Yeast   620 LMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEI-------YQSHQQFLKNLQNDIKSCL---DS 674

  Fly   636 TIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQEDIAGDSICNKCEELEKLI--ADLESKKNSCEC 698
            ...|:..|::.::::...|....::|             |.|:.....|||  .|||.||     
Yeast   675 IGSSILTSINEISQNCTTNLNSMNVL-------------IENQQSGSSKLIKEQDLEIKK----- 721

  Fly   699 DQLRLEIVSVRDKLESVESAFNLASSEIIQKATD-CERLSKELSTSQN-AFGQLQERYDALDQQ- 760
              |:.::::.|    .:.:.||...:|:.:...| ..|...|.....| ....|:::...|||. 
Yeast   722 --LKNDLINER----RISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDI 780

  Fly   761 WQAQQA---------------GITTLHEKHEHVQEKYQKLQEEYE------------QLESRARS 798
            ||...:               .|.:|....|:..:...:..|.:.            .:.|:.||
Yeast   781 WQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRS 845

  Fly   799 ASSAEF---------QRLQNDNT-----------KFQ----ADIASLNERLEEAQNMLTEVQNSE 839
            ....||         :...:|||           |||    :|||..||::   .:::.|:|:..
Yeast   846 LPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKI---MSLIDEIQSQI 907

  Fly   840 STVEKLRIQNHELTAKIKELETNFEEMQREYDCLSNQLMESVQENDALREEIKQRPTSHVEESMR 904
            .|:.             .|...|...:...::.|.|.::....||             .::.|..
Yeast   908 ETIS-------------NENNINLIAINENFNSLCNFILTDYDEN-------------IMQISKT 946

  Fly   905 SSGISSDFDEQKQDINLLHQFVQLSESVQQIELQHHSGISRLFRANQMKLDQSEPGLKLCLESAE 969
            ...:.|:..|:.|.:.:|...:..:.|::: .|..|:       ..:..:.::.|.|....:...
Yeast   947 QDEVLSEHCEKLQSLKILGMDIFTAHSIEK-PLHEHT-------RPEASVIKALPLLDYPKQFQI 1003

  Fly   970 YIEEDNRQSDAT--EPICLKGFLKRHRFQIKRLSQEHVDMGEEKRLLDII--SQLEQEIEEKSAL 1030
            |.:.:|:..|.|  ...|:........|.:.:.|.:......::.|..::  ..:......:|..
Yeast  1004 YRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKT 1068

  Fly  1031 MEATEATINEMREQMTNLESALLEKSVI 1058
            :..||.|   .||...||:.....:.::
Yeast  1069 LPNTEGT---GRESQNNLKRRFTTEPIL 1093

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 Motor_domain 8..321 CDD:473979 125/365 (34%)
SMC_prok_B 539..1431 CDD:274008 100/589 (17%)
SMC_prok_B 1137..1926 CDD:274008
YhaN 1717..2182 CDD:443752
KIP1NP_009490.1 KISc_BimC_Eg5 50..419 CDD:276815 131/376 (35%)
235kDa-fam <423..>948 CDD:130673 120/655 (18%)
AAA_13 <562..>741 CDD:463796 43/227 (19%)
Blue background indicates that the domain is not in the aligned region.

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