DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and KIP1

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_009490.1 Gene:KIP1 / 852216 SGDID:S000000159 Length:1111 Species:Saccharomyces cerevisiae


Alignment Length:1198 Identity:278/1198 - (23%)
Similarity:501/1198 - (41%) Gaps:291/1198 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAKNASSIQVCIKVRPCEPGLTSLWQVKERRSIHLA-------------------DSHAEPYVFD 47
            :|.:.|:|.|.::.|.     .:..:::|:.|:.::                   .|..:.|.||
Yeast    46 AATSDSNIHVYVRCRS-----RNKREIEEKSSVVISTLGPQGKEIILSNGSHQSYSSSKKTYQFD 105

  Fly    48 YVFDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGD---------------E 97
            .||...:..:.||:..||:.:...:.|:|.||||||||.:||||||.||               .
Yeast   106 QVFGAESDQETVFNATAKNYIKEMLHGYNCTIFAYGQTGTGKTYTMSGDINILGDVQSTDNLLLG 170

  Fly    98 QNPGVMVLAAKEIFQQISSETERDFLLRVGYIEIYNEKIYDLLNKKNQD----------LKIHES 152
            ::.|::.....::|:::|| ..:::.:::.::|:|||.:.|||:....|          ::|.::
Yeast   171 EHAGIIPRVLVDLFKELSS-LNKEYSVKISFLELYNENLKDLLSDSEDDDPAVNDPKRQIRIFDN 234

  Fly   153 GN---GIVNVNCEECIITSEVDLLRLLCLGNKERTVGETNMNERSSRSHAIFKI---IIESRKSD 211
            .|   .|:....:|..|.|..:.|.||..|:.:|.|..|..|:.|||||.:|.|   |:|....|
Yeast   235 NNNNSSIMVKGMQEIFINSAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKD 299

  Fly   212 HSDDDAVIQ-SVLNLVDLAGSERADQTGARGARLKEGGHINKSLLFLSNVIKSLSENADNRFTNY 275
            |..:...:: ..||||||||||..:::||...|.:|.|.||||||.|..||.:|.:::::  ..|
Yeast   300 HGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNH--IPY 362

  Fly   276 RDSKLTRILQASLGGNAFTSIICTIKPS--IMEESQSTLSFATRAKKIRIKPQVNEMVSDATMMK 338
            |:|||||:||.||||...|.||.||.|:  .|||:.|||.:|||||.|:..||||:.:|..|.:|
Yeast   363 RESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLK 427

  Fly   339 RLEREIKVLKDKLAEEERKNENQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGS 403
            ...:||    :||..:.:.:.|:|.:...:.|:  |:::                       |.|
Yeast   428 DYIQEI----EKLRNDLKNSRNKQGIFITQDQL--DLYE-----------------------SNS 463

  Fly   404 HLELAETGTTEDRID-QFPKVSHLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEF 467
            .|           || |..|:.:|.:.:        |::..     |.|..|||.....|..|:.
Yeast   464 IL-----------IDEQNLKIHNLREQI--------KKFKE-----NYLNQLDINNLLQSEKEKL 504

  Fly   468 LPA---ECIDFGSPRPDV-------LKPMLTIRQLPDLPL--TPKGPLTTDKIKKEI--QDLQMF 518
            :..   ..:||.:...::       |:.|..:.|..|..|  :.|...|...::.:|  |.||..
Yeast   505 IAIIQNFNVDFSNFYSEIQKIHHTNLELMNEVIQQRDFSLENSQKQYNTNQNMQLKISQQVLQTL 569

  Fly   519 TSLE---KHFEVECEEV-QGLKEKLAEVTAQRDNLEQESLAEKERYDALEKEVTSLRADNEAANS 579
            .:|:   .::..:|.|| :|:.|:|..      |:.    ..|.::|:..|.:.     |...|.
Yeast   570 NTLQGSLNNYNSKCSEVIKGVTEELTR------NVN----THKAKHDSTLKSLL-----NITTNL 619

  Fly   580 KISELEEKLSTLKQTMRIMEVE---------NQVAVGLEFEFEAHKKSSKLRVDDLLSALLEKES 635
            .::::.|.:.::..::.|.:.:         |::       :::|::..|...:|:.|.|   :|
Yeast   620 LMNQMNELVRSISTSLEIFQSDSTSHYRKDLNEI-------YQSHQQFLKNLQNDIKSCL---DS 674

  Fly   636 TIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQEDIAGDSICNKCEELEKLI--ADLESKKNSCEC 698
            ...|:..|::.::::...|....::|             |.|:.....|||  .|||.||     
Yeast   675 IGSSILTSINEISQNCTTNLNSMNVL-------------IENQQSGSSKLIKEQDLEIKK----- 721

  Fly   699 DQLRLEIVSVRDKLESVESAFNLASSEIIQKATD-CERLSKELSTSQN-AFGQLQERYDALDQQ- 760
              |:.::::.|    .:.:.||...:|:.:...| ..|...|.....| ....|:::...|||. 
Yeast   722 --LKNDLINER----RISNQFNQQLAEMKRYFQDHVSRTRSEFHDELNKCIDNLKDKQSKLDQDI 780

  Fly   761 WQAQQA---------------GITTLHEKHEHVQEKYQKLQEEYE------------QLESRARS 798
            ||...:               .|.:|....|:..:...:..|.:.            .:.|:.||
Yeast   781 WQKTASIFNETDIVVNKIHSDSIASLAHNAENTLKTVSQNNESFTNDLISLSRGMNMDISSKLRS 845

  Fly   799 ASSAEF---------QRLQNDNT-----------KFQ----ADIASLNERLEEAQNMLTEVQNSE 839
            ....||         :...:|||           |||    :|||..||::   .:::.|:|:..
Yeast   846 LPINEFLNKISQTICETCGDDNTIASNPVLTSIKKFQNIICSDIALTNEKI---MSLIDEIQSQI 907

  Fly   840 STVEKLRIQNHELTAKIKELETNFEEMQREYDCLSNQLMESVQENDALREEIKQRPTSHVEESMR 904
            .|:.             .|...|...:...::.|.|.::....||             .::.|..
Yeast   908 ETIS-------------NENNINLIAINENFNSLCNFILTDYDEN-------------IMQISKT 946

  Fly   905 SSGISSDFDEQKQDINLLHQFVQLSESVQQIELQHHSGISRLFRANQMKLDQSEPGLKLCLESAE 969
            ...:.|:..|:.|.:.:|...:..:.|::: .|..|:       ..:..:.::.|.|....:...
Yeast   947 QDEVLSEHCEKLQSLKILGMDIFTAHSIEK-PLHEHT-------RPEASVIKALPLLDYPKQFQI 1003

  Fly   970 YIEEDNRQSDAT--EPICLKGFLKRHRFQIKRLSQEHVDMGEEKRLLDII--SQLEQEIEEKSAL 1030
            |.:.:|:..|.|  ...|:........|.:.:.|.:......::.|..::  ..:......:|..
Yeast  1004 YRDAENKSKDDTSNSRTCIPNLSTNENFPLSQFSPKTPVPVPDQPLPKVLIPKSINSAKSNRSKT 1068

  Fly  1031 MEATEATINEMREQMTNLESALLEKSVI 1058
            :..||.|   .||...||:.....:.::
Yeast  1069 LPNTEGT---GRESQNNLKRRFTTEPIL 1093

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 128/372 (34%)
Motor_domain 8..321 CDD:277568 125/365 (34%)
Smc <680..1449 CDD:224117 78/439 (18%)
TMPIT 779..>867 CDD:285135 22/123 (18%)
Smc 1042..1910 CDD:224117 4/17 (24%)
KIP1NP_009490.1 KISc_BimC_Eg5 50..419 CDD:276815 131/376 (35%)
235kDa-fam <423..>948 CDD:130673 120/655 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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