DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmet and HIK

DIOPT Version :10

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_173273.2 Gene:HIK / 838418 AraportID:AT1G18370 Length:974 Species:Arabidopsis thaliana


Alignment Length:1119 Identity:279/1119 - (24%)
Similarity:447/1119 - (39%) Gaps:299/1119 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAKNASSIQVCIKVRP---------------C--EPGLTSLWQVKERRSIHLADSHAEPYVFDYV 49
            |......|.|.:::||               |  :..:.|..||:||  :|    |...:.||.|
plant    25 SRSREEKIVVTVRLRPMNKRELLAKDQVAWECVNDHTIVSKPQVQER--LH----HQSSFTFDKV 83

  Fly    50 FDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAKEIFQQI 114
            |...:..:.|::...|::..:.:.|.|.||||||||||||||||.      ||...|..:|:..|
plant    84 FGPESLTENVYEDGVKNVALSALMGINATIFAYGQTSSGKTYTMR------GVTEKAVNDIYNHI 142

  Fly   115 SSETERDFLLRVGYIEIYNEKIYDLLNK-KNQDLK-IHESGNGIVNVNCEECIITSEVDLLRLLC 177
            ....||||.:::..:|||||.:.||||. ..:.|| :.:...|.|.....|....::..|..|:.
plant   143 IKTPERDFTIKISGLEIYNENVRDLLNSDSGRALKLLDDPEKGTVVEKLVEETANNDNHLRHLIS 207

  Fly   178 LGNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGSERADQTGARGA 242
            :...:|.||||.:|:.|||||.|.::.|:|...::||......:.||.|||||||||.|:.|.|.
plant   208 ICEAQRQVGETALNDTSSRSHQIIRLTIQSTHRENSDCVRSYMASLNFVDLAGSERASQSQADGT 272

  Fly   243 RLKEGGHINKSLLFLSNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTSIICTIKPSI--M 305
            ||:||.|||.||:.|:.||:.||....:....|||||||||||.||||||.|:||||:.|::  :
plant   273 RLREGCHINLSLMTLTTVIRKLSVGKRSGHIPYRDSKLTRILQHSLGGNARTAIICTLSPALAHV 337

  Fly   306 EESQSTLSFATRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERK-----NENQQKVE 365
            |:|::||.||.|||::.....||.:|||..::|.|::|:..|     |.||:     .|...|::
plant   338 EQSRNTLYFANRAKEVTNNAHVNMVVSDKQLVKHLQKEVARL-----EAERRTPGPSTEKDFKIQ 397

  Fly   366 HLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPKVSHLPKPV 430
            .:|.:|                |:.:|:|      ..:.::|.|                     
plant   398 QMEMEI----------------GELRRQR------DDAQIQLEE--------------------- 419

  Fly   431 FFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDFGSPRPDVLKPMLTIRQLPDL 495
             ......|.:..|  |.:|                        .|.||.|.|.|.:..     .:
plant   420 -LRQKLQGDQQQN--KGLN------------------------PFESPDPPVRKCLSY-----SV 452

  Fly   496 PLTPKGPLTT----DKIKKEIQDLQM--------FTSLEKHFEVECEEVQGLKEKLAEVTAQRDN 548
            .:||.....|    ::.:|......|        ||.:.     |..:::.|:|:|.|...    
plant   453 AVTPSSENKTLNRNERARKTTMRQSMIRQSSTAPFTLMH-----EIRKLEHLQEQLGEEAT---- 508

  Fly   549 LEQESLAEKERYDALEKEVTSLRADNEAANSKISELE---EKLSTLKQTMRIMEVENQVAVGLEF 610
                     :..:.|:|||...|..|:.|...|::|:   .::.|:|.:..:.||.:.:|...  
plant   509 ---------KALEVLQKEVACHRLGNQDAAQTIAKLQAEIREMRTVKPSAMLKEVGDVIAPNK-- 562

  Fly   611 EFEAHKKSSKLRVDDLLSALLEKESTIESLQKSLDNL----------------TRDVLRNSKEGH 659
            ...|:.|....|:....|.:...|..:||:|||:|.|                |::....||:..
plant   563 SVSANLKEEITRLHSQGSTIANLEEQLESVQKSIDKLVMSLPSNISAGDETPKTKNHHHQSKKKK 627

  Fly   660 MLSIAPEQEDIAGDSICNKCEELEKLIADLESKKNSCECDQLRLEIVSVRDKLESVESAFNLASS 724
            :|.:.|       .|..|:...|:...:.|.:.:...:||                  |.|.|..
plant   628 LLPLTP-------SSASNRQNFLKSPCSPLSASRQVLDCD------------------AENKAPQ 667

  Fly   725 EIIQKATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHEKHEHVQEKYQKLQEEY 789
            |....|.                                  .|.||.....:...:|    .||.
plant   668 ENNSSAA----------------------------------RGATTPQGSEKETPQK----GEES 694

  Fly   790 EQLESRA-----RSASSAEFQRLQNDNTKFQADIASLNERLEEAQNMLTEVQNSESTVEKLRIQN 849
            ..:.||.     |.:||...:::|.   .||      |...|..:::...|...:..|.||:.|.
plant   695 GDVSSREGTPGYRRSSSVNMKKMQQ---MFQ------NAAEENVRSIRAYVTELKERVAKLQYQK 750

  Fly   850 HELTAKIKELETNFEEMQREYDCLSNQLMESVQENDALREEIKQRPTSHVEESMRSSGISSDFDE 914
            ..|..::.|||.|..         :...:|: :||..:.:|.:.:...|:          :..:|
plant   751 QLLVCQVLELEANDG---------AGYSVEN-EENTIMEDEEQNQVAWHI----------TFIEE 795

  Fly   915 QKQDINLLHQFVQLSESVQQIELQHHSGISRLFRANQMKLDQSEPGLKLCLESAEYIEEDNRQSD 979
            ::|.|.|.|        |..:.:.|.:....||:.:|......|..|:......:::.|....:.
plant   796 RQQIIELWH--------VCHVSIIHRTQFYLLFKGDQADQIYMEVELRRLTWLEQHLAEVGNATP 852

  Fly   980 ATEPIC----------LKGFLKRHRFQIKRLSQE-------------HVDMGEEKRLLDIISQLE 1021
            |..  |          :|...:...|..||::..             .|.:..::|.|..:::|.
plant   853 ARN--CDESVVSLSSSIKALRREREFLAKRVNSRLTPEEREELYMKWDVPLEGKQRKLQFVNKLW 915

  Fly  1022 QEIEEKSALMEATE 1035
            .:..:...:.|:.|
plant   916 TDPYDSRHVQESAE 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 Motor_domain 8..321 CDD:473979 137/333 (41%)
SMC_prok_B 539..1431 CDD:274008 100/544 (18%)
SMC_prok_B 1137..1926 CDD:274008
YhaN 1717..2182 CDD:443752
HIKNP_173273.2 KISc_CENP_E 31..353 CDD:276825 137/333 (41%)
COG4913 <467..>599 CDD:443941 34/151 (23%)
DUF3490 791..955 CDD:463424 25/149 (17%)
Blue background indicates that the domain is not in the aligned region.

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