DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and AT5G66310

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_001318888.1 Gene:AT5G66310 / 836763 AraportID:AT5G66310 Length:1063 Species:Arabidopsis thaliana


Alignment Length:1124 Identity:283/1124 - (25%)
Similarity:469/1124 - (41%) Gaps:280/1124 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IQVCIKVRP---------------CEPGLTSLWQVKERRSIHLADSHAEPYVFDYVFDEGASNQE 58
            |.|.:::||               |....|.::  :...||.....:...|.||.||......::
plant    19 IYVSVRMRPLNDKEKFRNDVPDWECINNTTIIY--RSHLSISERSMYPSAYTFDRVFSPECCTRQ 81

  Fly    59 VFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAKEIFQQISSETERDFL 123
            |:::.||.:..:.:.|.|.::||||||||||||||      .|:...|..:|:..|....||:|:
plant    82 VYEQGAKEVAFSVVSGVNASVFAYGQTSSGKTYTM------SGITDCALVDIYGYIDKHKEREFI 140

  Fly   124 LRVGYIEIYNEKIYDLLNKKNQDLK-IHESGNGIVNVNCEECIITSEVDLLRLLCLGNKERTVGE 187
            |:...:|||||.:.|||:.....|: :.:...|.|.....|..:........||.:...:|.:||
plant   141 LKFSAMEIYNESVRDLLSTDTSPLRLLDDPEKGTVVEKLTEETLRDWNHFKELLSVCKAQRQIGE 205

  Fly   188 TNMNERSSRSHAIFKIIIESRKSDHSDDD--AVIQSVLNLVDLAGSERADQTGARGARLKEGGHI 250
            |.:||.|||||.|.::.:||...:.|.:|  :.:.:.:|.:||||||||.|:.:.|.|||||.||
plant   206 TALNEVSSRSHQILRLTVESIAREFSTNDKFSTLTATVNFIDLAGSERASQSLSAGTRLKEGCHI 270

  Fly   251 NKSLLFLSNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTSIICTIKPS--IMEESQSTLS 313
            |:|||.|..||:.||:....... :||||||||||:||||||.|:||||:.|:  .:|:|::||.
plant   271 NRSLLTLGTVIRKLSKEKTGHIP-FRDSKLTRILQSSLGGNARTAIICTMSPARIHVEQSRNTLL 334

  Fly   314 FATRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKLAE---------------------EERK 357
            ||:.||::....|||.::||..::|.|:||:..|:.:|..                     |:.|
plant   335 FASCAKEVTTNAQVNVVMSDKALVKHLQRELAKLESELRSPSQASIVSDTTALLTEKDLEVEKLK 399

  Fly   358 NENQQKVEHLER---QIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDR--- 416
            .|..|..:.||:   :|| |:.:::    ..:|.|:|                 ||.:||..   
plant   400 KEVFQLAQQLEQARSEIK-DLRRMV----EEEKNQEK-----------------ETLSTETEGLN 442

  Fly   417 ---IDQFPKV---------SHLP-KPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFL 468
               ..|:||:         :..| .|:..|.|:...|........|:....|...:|.|.|.:.|
plant   443 VLMEHQYPKLRVRRTWDSENTTPLSPISAHRSSISPRSTEYSYEENVFQLSDFRIDSASSSPQQL 507

  Fly   469 PAECIDFGSPRPDVLKPMLTIRQLPDLPLTPKGPLTTDK--IKKE-------IQDLQMFTSLEKH 524
            .            .:.|.|.: .|.|:.:|.    |.|:  :.||       :|: :.|..:.:|
plant   508 A------------FVTPFLKV-PLDDIHVTD----TVDQSHVHKEEAIEEPHVQE-ERFYEMAEH 554

  Fly   525 ----FEVECEEVQGLKEKLAEVT-AQRDNLEQESLAEKERYDALEKE------------------ 566
                .|..|.||:.::.:.:::: ...:|:.:.|   .::|:|:..|                  
plant   555 TDGNSEDNCREVRCIETEKSDISIGPVENMPESS---PDKYEAVTAEEPVSVTEPKNLQHPTEEA 616

  Fly   567 --VT---SLRADNEAANSKISELEEKLSTLKQTMRIMEVENQVAVGLEFEFEAHKKSSKLRVDDL 626
              ||   :|:...||.|.:..|.|          |:.||.     |...|   .|:.|.|..:  
plant   617 VCVTETKNLQHPTEAENEEEEEEE----------RVKEVS-----GASPE---PKQESNLTKN-- 661

  Fly   627 LSALLEKESTIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQE---DIAGDSICNKCEELEKLIAD 688
             .||.:.|.:.:....|:.||:    |.|....:::.:||:.   .:..||         :|...
plant   662 -PALCDLECSPDEFDTSMSNLS----RISTPPALITPSPEKPFSWIMERDS---------QLFRG 712

  Fly   689 LE-SKKNSCECDQLRLEIVSVRDKLESVESAFNLASSEIIQKATDCERLSKELSTSQNAFGQLQE 752
            :: ::..||.                  .|..:..||..::|..|...     |.....|.:..|
plant   713 MKLTRSRSCR------------------PSLLSSPSSSWLEKDADTPP-----SWYDKEFIKTAE 754

  Fly   753 RYDALDQQWQAQQAGITTLHEKHEHVQEKYQKLQEEYEQLESRARSASSAEFQRLQNDNTKFQAD 817
            |             .:|....|::.:      ||:|:.     .||..:..|:|..:|..  ..|
plant   755 R-------------NLTMCDIKNQRL------LQDEFS-----GRSMPTTWFERSLSDTQ--TVD 793

  Fly   818 IASLNERLEEAQNMLTEVQNSESTVEKLRIQNHELTAKIKELETNFEEMQREYDCLSNQLMESVQ 882
            .||.....|.:.|. :..:.|:::|.:|:....   |.|.:..|.                |:..
plant   794 AASHGVSNEMSPNE-SPFRPSDASVFELQTSGR---ASISQDRTE----------------ETAA 838

  Fly   883 ENDALREEIKQRPTSHVEESMRSSGISSDFDEQKQD---------INLLHQFVQLSES------V 932
            :.|   ::|..|.....|:...:|..:..|.:...|         :|...:|.:|...      |
plant   839 QKD---KQIIHRSMEEREQKFLASNSTKSFKDAAMDPIQDYLDTALNWPVEFKRLQREIIELWHV 900

  Fly   933 QQIELQHHSGISRLFRANQ---MKLDQSEPGLKLCLESAEYIEEDNRQSDATEPICLKGFLKRHR 994
            .::.:.|.|....|||.:|   :.|:.....||...||  :.:..|..::.|...|.:. |.|.|
plant   901 CKVSMAHRSYFFLLFRGDQKDCLYLEVELRRLKYIRES--FAQNSNDGNNMTLISCTRA-LTRER 962

  Fly   995 FQIKRLSQEHVDMGEEKRL 1013
            :::.:|.|..:...|.:.|
plant   963 YKLSKLMQRKLSKEERENL 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 128/338 (38%)
Motor_domain 8..321 CDD:277568 127/331 (38%)
Smc <680..1449 CDD:224117 66/353 (19%)
TMPIT 779..>867 CDD:285135 19/87 (22%)
Smc 1042..1910 CDD:224117
AT5G66310NP_001318888.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0242
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47968
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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