DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmet and AT4G24170

DIOPT Version :10

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_567695.1 Gene:AT4G24170 / 828517 AraportID:AT4G24170 Length:1004 Species:Arabidopsis thaliana


Alignment Length:1130 Identity:300/1130 - (26%)
Similarity:481/1130 - (42%) Gaps:253/1130 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IQVCIKVRP-----------CEPGLTSLWQVKERRSI-----HLADSHAEPYVFDYVFDEGASNQ 57
            |.|.::|||           |:      |:.....:|     :|.|..:  |.||.||......:
plant     7 ILVSVRVRPLNEKEKTRNDRCD------WECINDTTIICKFHNLPDKSS--YTFDKVFGFECPTK 63

  Fly    58 EVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAKEIFQQISS-ETERD 121
            :|:|..||.:....:.|.|.:|||||||||||||||      .|:...|..:||..|.. :.||.
plant    64 QVYDDGAKEVALCVLSGINSSIFAYGQTSSGKTYTM------SGITEFAMDDIFAYIDKHKQERK 122

  Fly   122 FLLRVGYIEIYNEKIYDLL-NKKNQDLK-IHESGNGIVNVNCEECIITSEVDLLRLLCLGNKERT 184
            |.|:...:|||||.:.||| ...:..|: :.:...|.|.....|..:.....|..||.:...:|.
plant   123 FTLKFSAMEIYNEAVRDLLCEDSSTPLRLLDDPERGTVVEKLREETLRDRSHLEELLSICETQRK 187

  Fly   185 VGETNMNERSSRSHAIFKIIIESRKSDHS-DDDAVIQSVLNLVDLAGSERADQTGARGARLKEGG 248
            :|||::||.|||||.|.::.|||.....| :..|.:.:.:..|||||||||.||.:.|:|||||.
plant   188 IGETSLNEISSRSHQILRLTIESSSQQFSPESSATLAASVCFVDLAGSERASQTLSAGSRLKEGC 252

  Fly   249 HINKSLLFLSNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTSIICTIKP--SIMEESQST 311
            |||:|||.|..||:.||: ..|....|||||||||||.||||||.|:||||:.|  |.:|:|::|
plant   253 HINRSLLTLGTVIRKLSK-GKNGHIPYRDSKLTRILQNSLGGNARTAIICTMSPARSHLEQSRNT 316

  Fly   312 LSFATRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERKN------------------ 358
            |.|||.||::....|||.:||:..::|:|:||:..:     |.|.||                  
plant   317 LLFATCAKEVTTNAQVNLVVSEKALVKQLQRELARM-----ENELKNLGPASASSTSDFYALMLK 376

  Fly   359 ENQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPKV 423
            :.::.:..:|.||          |.|.          |....:.|.:|.....|.|:|.......
plant   377 QKEELIAKMEEQI----------HELK----------WQRDVAQSRVENLLKSTAEERSSSSSMD 421

  Fly   424 SHLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEE---FLPAECIDFGSPRPDVLKP 485
            |...:..:..|.     :|. |:.:|.||      :||..|.:   ||    :|..:|       
plant   422 SRRRRISYDSTD-----FDE-PRMLNNLG------KSNLYSPDEDGFL----LDDTTP------- 463

  Fly   486 MLTIRQLPDLPLTPKGPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLE 550
                 |.|...|..|.........:|.:|...        ||.|.||...:.:..::   :|:| 
plant   464 -----QFPGHNLHDKWEEMAQSTTQEPEDACK--------EVRCIEVNSGEAERVQI---QDSL- 511

  Fly   551 QESLAEKERYDALEKEVTSLRADNEAANSKISELEEKLSTLKQTMRIMEVENQVAVGLEFEFEAH 615
             :.:.||:.|   |:...|.:.|   |:|.|..::.:||...:.    |.|:.|:|         
plant   512 -DDIVEKKEY---EQNYESQKDD---ADSSIKNIDMELSLYTKP----EAEDGVSV--------- 556

  Fly   616 KKSSKLRVDDLLSALLEKESTIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQEDIAGDSICNKCE 680
            ||        |:..:.|.|.::|..::|                     |::|::......:..|
plant   557 KK--------LIEDVQETEQSVEKQKQS---------------------PKKEEMEQYLSRDMSE 592

  Fly   681 ELEKLIADLESKKNSCECDQLRLEIVSVRDKLES--VESAFNLASSEIIQKATDCERLSKELSTS 743
            ::.|.:.:.|      :|    ::.....||||:  |.:...|..|:..:::.:.|...|.||:.
plant   593 QVTKSLPEEE------QC----VQEYGAYDKLEAQDVLTINKLEESQQTEQSVEKEDTKKNLSSK 647

  Fly   744 QNAFGQLQERYDALDQQWQAQQAGITTLHEKHEHVQEKYQKLQEEYEQLESRARSASSAEFQRLQ 808
            :.   .|::.. ::||..|..::            ..:.:|..|.||..:              :
plant   648 KE---DLKQNL-SMDQSEQLYKS------------PPEDEKCVEVYEGSD--------------K 682

  Fly   809 NDNTKFQADIASLNERLEEAQNMLTEVQNSESTVEKLRIQNHELTAKIKELETNFEEMQREYDCL 873
            :||| ::|    |.::::|.|..:....:.:|..||.....:.:...:...|  :.:|:|...|.
plant   683 DDNT-YEA----LKKKVKEMQKTIEYFMSIQSAEEKQSPSFNIIDDTLSPGE--YFKMRRSRSCR 740

  Fly   874 SNQLMESVQENDALR----EEIKQRPTSHVEESMRSSGISSDFDEQKQDINLLHQFVQLSESVQQ 934
            .|.|........|.|    |.......|.:..||.:..| .|.|.:... :..|:|:   ..:::
plant   741 ENLLFTKAAAAAASRGFIFETTNTSFDSDITVSMDAQSI-KDSDTETSS-SSFHEFM---AGLRE 800

  Fly   935 IELQHHSGISRLFRANQMKLDQSEPGLKLCLESAEYIEEDNRQSDATE--PICLKGFLKRHRFQI 997
            ..:||||..|.......||.:.::.|       .|..|.:.:||...|  .:|....:.|..|.:
plant   801 RTMQHHSTHSDDTDTKTMKPENTDDG-------GEKTEFERQQSQIIELWQVCNVPLVHRTYFFL 858

  Fly   998 KRLSQEHVDMGEEKRLLDIISQLEQEIEEKSALMEATEATINEMREQMTNLESALLEKSVIINKV 1062
                   :..|:..   |.: .:|.|:...|.|.::||.:..:..:.:|. |...|.|. |.||.
plant   859 -------LFKGDPS---DFV-YMEVELRRLSFLKDSTETSRKQTAKAVTR-EREWLAKQ-IPNKF 910

  Fly  1063 EDYQRQIESLEKQNAEMTMVYEELQ 1087
            ...::: |..:|...|::.....||
plant   911 GKKEKE-EVYKKWGVELSSKRRSLQ 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 Motor_domain 8..321 CDD:473979 139/333 (42%)
SMC_prok_B 539..1431 CDD:274008 112/557 (20%)
SMC_prok_B 1137..1926 CDD:274008
YhaN 1717..2182 CDD:443752
AT4G24170NP_567695.1 KISc_CENP_E 6..326 CDD:276825 139/333 (42%)
PTZ00121 <473..724 CDD:173412 67/356 (19%)
DUF3490 831..980 CDD:463424 27/118 (23%)
Blue background indicates that the domain is not in the aligned region.

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