DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and POK2

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_188535.4 Gene:POK2 / 821439 AraportID:AT3G19050 Length:2771 Species:Arabidopsis thaliana


Alignment Length:2552 Identity:565/2552 - (22%)
Similarity:1058/2552 - (41%) Gaps:642/2552 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SIQVCIKVRPCEPGLTSLWQVKER------RSIHLADSHAEPYV--------FDYVFDEGASNQE 58
            ::|:.|:|||    |.|:    ||      |.:....|....::        ||:|..|....:.
plant   193 NVQILIRVRP----LNSM----ERSINGYNRCLKQESSQCVAWIGPPETRFQFDHVACETIDQET 249

  Fly    59 VFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGD--------EQNPGVMVLAAKEIFQQIS 115
            :|......:|..|:.|:|..|||||||.|||||||:|:        ..|.|:|....:.:|.:|.
plant   250 LFRVAGLPMVENCLSGYNSCIFAYGQTGSGKTYTMLGEVGDLEFKPSPNRGMMPRIFEFLFARIQ 314

  Fly   116 SETE--RD----FLLRVGYIEIYNEKIYDLLNKKNQDLKIHES-GNGIVNVNCEECIITSEVDLL 173
            :|.|  ||    :..:..::|||||:|.|||...:.:|::.|. .:|:...|..||.:.|..|:|
plant   315 AEEESRRDERLKYNCKCSFLEIYNEQITDLLEPSSTNLQLREDIKSGVYVENLTECEVQSVQDIL 379

  Fly   174 RLLCLGNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQ-SVLNLVDLAGSERADQT 237
            .|:..|:..|.||.||||..|||||::|..:||||.  ..|..|.:: :.|||||||||||...:
plant   380 GLITQGSLNRRVGATNMNRESSRSHSVFTCVIESRW--EKDSTANMRFARLNLVDLAGSERQKTS 442

  Fly   238 GARGARLKEGGHINKSLLFLSNVIKSLSE--NADNRFTNYRDSKLTRILQASLGGNAFTSIICTI 300
            ||.|.||||...|||||..|.:||..|.:  |...|...||||:||.:||.|||||:.|.||...
plant   443 GAEGDRLKEAASINKSLSTLGHVIMVLVDVANGKPRHIPYRDSRLTFLLQDSLGGNSKTMIIANA 507

  Fly   301 KPSI--MEESQSTLSFATRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERKNENQ-- 361
            .||:  ..|:.:||.||.|||.|:....|||..::..:  .|.|:|::||::|:..:|:|.::  
plant   508 SPSVSCAAETLNTLKFAQRAKLIQNNAVVNEDSNEDVL--ELRRQIRLLKEELSLLKRQNISRAL 570

  Fly   362 ----QKVEHLERQIKHD---MHKIICGHSLSDKGQQ------------------KRRRTWCPTAS 401
                ......|.|:...   ||         :.|||                  |:.::...|.:
plant   571 SFGSATANFAESQVDSPSSVMH---------ETGQQQAGNLLVYESGGCVRMSRKQLKSLEITLA 626

  Fly   402 GS----HLELAETGTTEDRIDQFPKVSHLPKPVFFHTSNAGK-------RWDNIPKTINILG--- 452
            ||    |:..|.....|..|:      ||.:.|.....:...       |.|.|.:..::||   
plant   627 GSLRREHVADASIKKLEAEIE------HLNRLVRQREEDTRSTKMMLRFREDKIQRLESLLGNHI 685

  Fly   453 SLD--IGTESNSISEE--FLPAECIDFGSPRPDVLKPMLTIRQLPDLPLTPKGPLTTDKIKK--- 510
            |.|  :..|:|.:|||  .|.|: ||        ..|.||...|.::.|       .|::::   
plant   686 SADSFLLEENNVLSEEIQLLQAK-ID--------KNPELTRFALENIRL-------LDQLRRFQE 734

  Fly   511 ------------EIQDL--QMFTSL------EKHFE--VE-----------CEEVQGLKEKLAEV 542
                        |:.:|  |:|..|      :||.:  :|           |...:.||:...|:
plant   735 FYEEGEREILLGEVSNLRNQLFQFLDENSDWQKHVDDGIEPQGASRMSKENCSLQEELKKTCYEL 799

  Fly   543 TAQRDN----LEQESLAEKERYDALEKEVTSLRADNEAANSKISELEEKLSTLKQTMRIMEVENQ 603
            ...|.|    ||:.:...:|..| |:..|:.:||.....:|.:::.:..|.|          :| 
plant   800 EKCRSNLGSCLEENAKLSREIND-LQAMVSDIRACTPDEHSSVNKQKALLGT----------QN- 852

  Fly   604 VAVGLEFEFEAHKKSS-----------KLRVD-DLLSALLEKESTI------ESLQKSLDNLTRD 650
                    ||.|:..:           ||::| |:...:|::|.|:      ::::...|   .:
plant   853 --------FEPHETLACEQANYVEEIIKLQLDLDVQKIILDEERTLRGDTEAQAVRLKFD---IE 906

  Fly   651 VLRNSKEGHMLSIAPEQEDIAGDSICNKCEELEKLIADLESKKNSCECDQLRLEIVSVRDKLE-- 713
            ||::    .:|.|:.:|:     ::.::..|.:..:|.|||:           .|:.:::.:|  
plant   907 VLKD----QLLLISKQQK-----NVYSELGETKSAVAALESQ-----------NIILIQEAVELR 951

  Fly   714 -SVESAFNLASSEII----QKATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHE 773
             ..|:.|.|...:.:    .|:..|:......:....           :|.:::..||.:    |
plant   952 RIKENYFELLKKQELDIPAMKSKQCDEFKDNPAEDSE-----------IDTKFKKMQASL----E 1001

  Fly   774 KHEHVQEKYQK-------LQEEYEQLESRARSASSAEFQRLQNDNTKFQADIASLNERLEEAQNM 831
            |.:.:...|:.       ..||.:::..:|.:|::.....|||:              ||..|..
plant  1002 KAKRLNMLYKSDIASKACGDEEMDEVCKQAEAATAEVIVCLQNE--------------LEVLQKE 1052

  Fly   832 LTEVQNSESTVEKLRIQNHELTAKIKELETNFEEMQREYDCLSNQLMESVQENDALREEIKQRP- 895
            :.:.|:.|:..||          :::.|||..||:|       ::|.::..:|:.|:|:::.:. 
plant  1053 VNDFQSKENVTEK----------QVEILETQMEELQ-------DKLRDTTMDNEQLQEQLRGKDM 1100

  Fly   896 ------------TSHVEESMRSSG------------ISSDFDEQKQDINLLHQFVQLSESVQQIE 936
                        ||.:||.:.:..            ||....:::  |.:..|...|..::.:.|
plant  1101 ELLIISNEMELLTSELEEILLNGNEGLTDACYQADLISGSLPDKR--IWISEQVGGLIRTLSERE 1163

  Fly   937 LQHHSGISRLFRANQMKLD-----QSEPGLKLCLESAEYIEEDNRQSDATEPICLKGFLKRHRFQ 996
            |......|.|..||:.:.|     :|..|..:.:..|...|.:.:::|.   :.||..|......
plant  1164 LMIEDLESCLEDANKKRCDIESMLKSLKGAAIVMNEAHQREFEEKETDV---LLLKSQLCTKTET 1225

  Fly   997 IKRLSQEHVDMGEE----------------KRLLDIISQLEQEIEEKSALMEATEATINEMREQM 1045
            |.|| ||.:.|.|.                .|..::......|:::|...:..:..||..:::|:
plant  1226 ILRL-QEKLKMAERLIYEASDCATASLIIVNRYSEVTESHTFELKQKDFQVAESTGTILSLKQQV 1289

  Fly  1046 TNLESALLEKSVIINKVEDYQRQIESLEKQNAEMTMVYEELQDRVTRESSMSESLLRVPPDEDTL 1110
            .:||:.          .::::.::...||..:.|....||:::  |..|:|.|.|..:......|
plant  1290 QDLEAT----------CKEFRSKLLEEEKNASAMEQKLEEIEE--TSISAMKEKLSELKGGVSDL 1342

  Fly  1111 PGCPT-------------------------SPSRR-------EQEVATLKTSITELQSQVSD--- 1140
            ..|.|                         .|.|.       |:......|....|.|:||.   
plant  1343 RSCITMCQEHDKYTEAENSLSSPAHCSEGQEPGRNVVVSSCIEKTPNNNHTESMRLSSKVSSERG 1407

  Fly  1141 -----LKAELEN---HLRQIQLKDGNIARLQTDFEEMSERCLS-----------MEVRLAELDED 1186
                 ||.|:|:   .|:::|::..|:...:.:.:...:|.||           :...::.::|.
plant  1408 KVIILLKQEMESALASLKEVQVEMANLKGEKEELKASEKRSLSNLNDLAAQICNLNTVMSNMEEQ 1472

  Fly  1187 TKQKQELLDRQAQKLSDDLCLI----DQLQKKNAQLVEQYHKATESLSLADAKPDQILLSSQYDS 1247
            .:.|.|:.|.:.:.|..::..:    ||...:|..:::::.:|..::..||...:::::::    
plant  1473 YEHKMEVTDHKLKTLEHEIAKMKIEADQEYVENLCILKKFEEAQGTIREADITVNELVIAN---- 1533

  Fly  1248 QIEKLNQLLNAAKDELHDVRRIKDDEISAL-----RMEFLLQIET-NEKENQAKFYAELQETKDR 1306
              ||:.          .|:.:.|...||.:     .:|.|.::|: |.|||:...|.|     ..
plant  1534 --EKMR----------FDLEKQKKRGISLVGEKKALVEKLQELESINVKENEKLAYLE-----KL 1581

  Fly  1307 YESN---VAELKEKLLQVEETL---SSVTVRCQA-ELEALKS---------AHKENI-SQAVEER 1354
            :||:   :..|.|:|..|...|   |||.:...| :|..|||         ...|:| |:.:.:.
plant  1582 FESSLMGIGNLVEELATVVRKLQDESSVALTGMAKDLSELKSWVSETNSARLFLEDIWSEIIMKD 1646

  Fly  1355 NNLIVQHQAEMETIRETLKNKLAEASTQQSKMEDAFRAEINEVRATLMEQLNQTKED----RDKG 1415
            ..:.|.|...|..:.||:..                   ||.....|...|..:...    ||..
plant  1647 CAISVLHLCHMGILLETVTG-------------------INTENGLLQRGLCVSNSSIAGLRDNN 1692

  Fly  1416 ASKLEEVKKTLEQMIN-GGRVMSDTIAELEKTKAEQDLAVNKLTKDNIELEKQCSKTQEQLQMES 1479
            .    .:::.||...| .|::::|.....|:....:: |.|.||......:::.|..|.|..:..
plant  1693 L----RLRRELEMFANLKGKLLTDIKNGFERISRNEE-ATNLLTTKLSSFDQKISGLQYQEDLML 1752

  Fly  1480 LTRDQISFEIEAHIKKLELIVASSKKRIIELEEKCDQ---------QVLELDKCR--LEKLSLES 1533
            ...:.:..:::..:|:::|......:.::|.|...:|         |:..:|.|.  :|.|.|..
plant  1753 QRSNSMGSQLDILLKEIDLSNGDLAETLLEQERHLNQKNDFFDTEVQLYLMDLCSKDVELLVLAQ 1817

  Fly  1534 EIQKANS----------EHSCTMEKLQELQAEMKVLSNRNE---KEKCDFETKLETFTFKITDLE 1585
            ..::.:|          :|...:|.|:|     |::.::.|   |::|..:.||||.:.|     
plant  1818 TAKEYSSCLAVVDRELLDHHVIVEDLKE-----KLIVSQVEGELKDQCLVDNKLETVSVK----- 1872

  Fly  1586 EVLKEAQHKV-ILYDDLVSQHERLKICLAEANELSSNLQKKVMSLHTELIDSQKGIS-------- 1641
            |.|.|||.|: :|..||    :|....:||.:|::.:..::|:.|.:.:...|:.::        
plant  1873 EELTEAQSKIKVLSSDL----DRSVQKIAEIDEVNKDFGERVIFLESSITGLQQELAMKASELYS 1933

  Fly  1642 ---SRDVEINEL---REELKAAMDAKATASAEQMTL----------------VTQLKDVE----E 1680
               ||.|...||   ..:::...|..::...|.::|                ||:|...:    .
plant  1934 LEHSRSVTAEELDIKERDVQVYADIVSSLKKENVSLKNKFIHFGEDQFKALDVTRLSIAKCSHLT 1998

  Fly  1681 RMANQAEKFTREAANLKGSINELLLK-LNSMQETKDMLESGNEELKEQLRNSQNLRNMLDEESKM 1744
            ..:.:.||.||:...:...:.:|:.: ::......|.::|...:::|.|..:.||.:.|..:..:
plant  1999 EDSKKLEKLTRDGMAISDKMLQLICENVDKASVFADTVQSLQIDVQELLSENLNLHDELLRKDDV 2063

  Fly  1745 CISLKEKLVKLEDAKTSLEQQLRDNKSEIYQRHTELTKEVELGRNRIGE-LTKKCEELCSDLENS 1808
            ...|...|..|:::.::    .||.|.|        |||:.:....:.: |..|..||...:.::
plant  2064 LKGLSFDLSLLQESASN----SRDKKDE--------TKEIMVHVEALEKTLALKTFELEDAVSHA 2116

  Fly  1809 DQIRLDLQETKEQLKKTLENNLGWQQKVD-EVTRECEKLRFDMQSKEVQNESKVQELISE-CEEL 1871
            ..:.:.|||:||     :..||    :|| |..|:|:: :...::|:::.|:  ::|::| |...
plant  2117 QMLEVRLQESKE-----ITRNL----EVDTEKARKCQE-KLSAENKDIRAEA--EDLLAEKCSLE 2169

  Fly  1872 RSTLKSKEASFQSEKESMD----------------RTISSLLEDKRNLEEKLCSANDIVAKLETE 1920
            ...:::|:.|...|.|..:                |.::..::::.||::::.:..:...|:::|
plant  2170 EEMIQTKKVSESMEMELFNLRNALGQLNDTVAFTQRKLNDAIDERDNLQDEVLNLKEEFGKMKSE 2234

  Fly  1921 IAALRPRKSLDRNPVPRKSITFESEIRKNRRISVHDERRQS---YWNDVREFGIMTDPVDNNCNC 1982
                  .|.::...:..:.|   :|.||    :..|||.:.   ....|.|.....:.::|..|.
plant  2235 ------AKEMEARYIEAQQI---AESRK----TYADEREEEVKLLEGSVEELEYTINVLENKVNV 2286

  Fly  1983 AELNSKLQDCQRELFIRESQVTALKMELDHHPLKDENAQLTKRVIEEQDKAKVEQKRLKMKLQDL 2047
            .:..::.|..|||           ::|::.|.::.:  ..:.|..:|:.|..:::|.:.:.....
plant  2287 VKDEAERQRLQRE-----------ELEMELHTIRQQ--MESARNADEEMKRILDEKHMDLAQAKK 2338

  Fly  2048 NARINDLTTASAKEPESNQMAQAAKPATVAAQTQTESDLETILEKTNVKYQEAVRM---LRYRYH 2109
            :....:..||..| .|..|:::......:.|:.|....:.        |::|...|   ::...|
plant  2339 HIEALERNTADQK-TEITQLSEHISELNLHAEAQASEYMH--------KFKELEAMAEQVKPEIH 2394

  Fly  2110 LIQELKEKLRQNE---NSDTSNITSLSAGQTSALKAQCESQKKEILAIKYKYEAAKRILAIRNDD 2171
            :.|.:...|.:..   ....|....:..|.|..::::   :.:|:.|.:.:.|..:.:::.|..:
plant  2395 VSQAIDSSLSKGSGKPRGSGSPFRCIGLGITQQMRSE---KDEELAAARLRIEELETVVSTRQKE 2456

  Fly  2172 LDALREKLAKYETTTSD 2188
            :..|..||||.::.|.|
plant  2457 IFLLNSKLAKVDSMTHD 2473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 139/353 (39%)
Motor_domain 8..321 CDD:277568 138/346 (40%)
Smc <680..1449 CDD:224117 173/914 (19%)
TMPIT 779..>867 CDD:285135 20/94 (21%)
Smc 1042..1910 CDD:224117 204/1032 (20%)
POK2NP_188535.4 Motor_domain 192..540 CDD:277568 142/356 (40%)
KISc 193..537 CDD:214526 139/353 (39%)
Kinesin-relat_1 670..755 CDD:289481 24/100 (24%)
SMC_prok_B <877..1606 CDD:274008 155/836 (19%)
Smc 1410..2238 CDD:224117 183/916 (20%)
KASH_CCD 2086..2284 CDD:291334 45/230 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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