DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and Kif27

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_780423.2 Gene:Kif27 / 75050 MGIID:1922300 Length:1394 Species:Mus musculus


Alignment Length:1582 Identity:364/1582 - (23%)
Similarity:632/1582 - (39%) Gaps:402/1582 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IQVCIKVRP--CEPGLTSLWQVKERRSIHLAD---------SHAEPYVFDYVFDEGASNQEVFDR 62
            |:|.:::||  |:       :|.....:.:.|         .....:.||:||.:.::..||::.
Mouse     6 IKVAVRIRPLLCK-------EVLHNHQVCVRDIPNTQQIIIGRDRVFTFDFVFGKNSTQDEVYNT 63

  Fly    63 MAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGD------EQNPGVMVLAAKEIFQQISSETERD 121
            ..|.:|.:.::|:|.|:||||||.||||||:.|.      |...|::..|.:||||.||.....|
Mouse    64 CIKPLVLSLIEGYNATVFAYGQTGSGKTYTIGGGHVASVVEGQKGIIPRAIQEIFQSISENPSID 128

  Fly   122 FLLRVGYIEIYNEKIYDLLNKKN--QDLKIH--ESGNGIVNVNCEECIITSEVDLLRLLCLGNKE 182
            |.::|.|||:|.|.:.|||..:.  :||.|.  |.||.:: |..:||.:.|..|::.||.:||..
Mouse   129 FKIKVSYIEVYKEDLRDLLELETSMKDLHIREDEKGNTVI-VGAKECQVESVEDVMSLLQVGNAA 192

  Fly   183 RTVGETNMNERSSRSHAIFKI-IIESRKSDHSDDDAV------IQSVLNLVDLAGSERADQTGAR 240
            |..|.|.|||.||||||||.| :.:..|:..:.::..      |.|..:.||||||||..:||..
Mouse   193 RHTGTTQMNEHSSRSHAIFTISVCQVEKNAEAAENGEWYSHRHIVSKFHFVDLAGSERVTKTGNT 257

  Fly   241 GARLKEGGHINKSLLFLSNVIKSLSE-NADNRFTNYRDSKLTRILQASLGGNAFTSIICTIKPSI 304
            |.|.||...||..||.|.|||.:|.: ...:....|||:|:||:|:.||||:|.|.:|..:.||.
Mouse   258 GERFKESIQINSGLLALGNVISALGDPRRKSSHIPYRDAKITRLLKDSLGGSAKTVMITCVSPSS 322

  Fly   305 --MEESQSTLSFATRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEER--KNENQQKVE 365
              .:||.::|.:|.||:.||.||.:| :...|..|..:|.|||:|::.|...:.  ...:|...|
Mouse   323 SDFDESLNSLKYANRARNIRNKPALN-ISPQADRMDEMEFEIKLLREALQSHQASISQASQASSE 386

  Fly   366 HLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQ-FPKVSHLPKP 429
            ::.     |.::|   |||.::..|.:.               |....:|.|:| |..:..|...
Mouse   387 NVP-----DQNRI---HSLEEQVAQLQE---------------ECLGYQDCIEQAFAFLVDLKDA 428

  Fly   430 VFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDFGSPRPDVLKPMLTIRQLPD 494
            |..:.....|..:...:|..:                            |..||.|:...:.:.:
Mouse   429 VKLNQKQQHKLQEWFSRTQEV----------------------------RKAVLTPLPGNQGIGN 465

  Fly   495 LPLTPKGP--LTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLEQESLAEK 557
            |   .:||  ||..::|:|::..|            |                            
Mouse   466 L---EEGPQHLTVLQLKRELKKYQ------------C---------------------------- 487

  Fly   558 ERYDALEKEVTSLRADNEAANSKISELEEKLSTLKQTMRIMEVENQVAVGLEFEFEAHKKSSKLR 622
                       :|.||......|..|||| |.|..|.|  |:.....||.|:   ||.|.:.   
Mouse   488 -----------ALAADQVVFTQKDLELEE-LRTQVQLM--MQESKGHAVSLK---EAQKVNR--- 532

  Fly   623 VDDLLSALLEKESTIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQEDIAGDSICNKCEELEKLIA 687
                    |:.|..||. |..:|.|:.::.:.|     ||:....::..||....:..|.....|
Mouse   533 --------LQNEKIIEQ-QLLVDQLSAELAKRS-----LSVPTSAKESCGDGPDARASEKRPHTA 583

  Fly   688 DLESK-------------KNSCECDQLRLEIVSVRDKLESVESAFNLASSEIIQKATDCERL--- 736
            ..||.             |..|....:.        .|:.|.:.|...|..::....|.:.:   
Mouse   584 PFESHWGHYVYIPSRQDFKKVCSSTPVY--------SLDQVFAGFRTRSQMLMGHLEDQDEVLHC 640

  Fly   737 -SKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHEKHEHVQEKYQKLQEEYEQLESRARSAS 800
             ..:.|..:::.||.:.|..:....|..:...:.:|.|                       .|.:
Mouse   641 QFSDNSDDEDSEGQEKPRVRSRSHSWAKKPGSVCSLVE-----------------------LSDT 682

  Fly   801 SAEFQR--LQNDNTKFQADIASLNERLEEAQNM-LTEVQNSESTVEKLRIQNHELTAKIKELE-- 860
            .||.||  |.|.:.|.        |.|:|:|.: |.:::.||..:.|.:.:..|||..|:..|  
Mouse   683 QAESQRSYLGNGDLKM--------ESLQESQEINLQKLRTSELILNKAKQKMRELTINIRMKEDL 739

  Fly   861 --------TNFEEMQREYDCLSNQLMESVQENDALREEIKQRPTSHVEESMRSSGIS-------- 909
                    .|.:.:.|:|.....:|     |::|.:.:::...|....:.:.|..:|        
Mouse   740 IKELIKTGNNAKSVSRQYSLKVTKL-----EHEAEQAKVELTETRKQLQELESKDLSDVALKVKL 799

  Fly   910 -----SDFDEQKQDINLLHQFVQLSESVQQIELQHHSGISRLFRANQMKLDQSEPGLKLCLESAE 969
                 ...|..|..:.:|.:..|.|:.:..:.:|:....|.|    :..:|.             
Mouse   800 QKEFRKKMDAAKMRVQVLQKKQQDSKKLASLSIQNEKRASEL----EHNVDH------------- 847

  Fly   970 YIEEDNRQSDATEPICLKGFLKRHRFQIKRLSQEHVDMGEEKRLLDI-ISQLEQEIEE---KSAL 1030
                                ||..:.|::|..:|.   ||:|:.||. |.:.:|:|:|   |:..
Mouse   848 --------------------LKYQKVQLQRRLREE---GEKKKQLDAEIKRDQQKIKELQLKAGQ 889

  Fly  1031 MEATEATINEMREQMTNLESALLEKSVIINKVEDYQR----QIESLEKQNAEMTMVYEELQDRVT 1091
            .|.......:......|...:.........|:::.::    ::|.:..|..|:.|:.|:|:.|  
Mouse   890 GEGLNPKAEDQDGFNLNRRKSPFRSGDQFQKLDEQRKWLDEEVEKVLSQRQELEMLEEDLKKR-- 952

  Fly  1092 RESSMSESLLRVPPDEDTLPGCPTSPSRREQEVATLKTSITELQSQVSDLKAELENHLRQIQLKD 1156
                                          :.:.:.|.::.:.:|.:.:.|......|....||.
Mouse   953 ------------------------------EAIVSKKEALLQEKSLLENKKLRSSQALSTDGLKI 987

  Fly  1157 GNIARLQTDFEEMSERCLSME-------VRLAELDEDTKQKQELLDRQAQKLSDDLCLIDQLQKK 1214
            .  |||....:|:||:.|.:|       ::::|..:..:::::.|.||...:.:.|.....|..|
Mouse   988 S--ARLNLLDQELSEKSLQLESSPTEEKMKISEQVQALQRERDQLQRQRNSVDERLKHGRVLSPK 1050

  Fly  1215 NAQLVEQYHKATESLSLA-DAKPDQILLSSQYDSQIEKLNQLLNAAKDELHDVRRIKDDEISALR 1278
            ...|:.|..:..|:|..| :.|.:.|  .|:.:|.......|..:..:.|..:..:...||.|:.
Mouse  1051 EEHLLFQLEEGIEALEAAIEFKNESI--QSRQNSLKASFQNLSQSEANVLEKLVCLNITEIRAIL 1113

  Fly  1279 MEFLLQIETNEKENQAKFYAELQETKDRYESNVAELKEKLL-------QVEETLSSVTVRCQAEL 1336
            .::..::            ..|:||:.:.:....|:|.|:|       ::|..|..:.::|...|
Mouse  1114 FKYFNKV------------INLRETERKQQLQNKEMKMKVLERDNVVHELESALEHLRLQCDRRL 1166

  Fly  1337 EALKSAHKENISQAVEERNNLIVQH--QAEMETIRETLKNKLAEASTQQSKMEDAFRAEINEVRA 1399
            ...:..|        |::..|::||  ..:.::|.|||||  .|...||.:.:..|..:.:    
Mouse  1167 TLQQKEH--------EQKMQLLLQHFKDQDGDSIIETLKN--YEDKIQQLEKDLYFYKKTS---- 1217

  Fly  1400 TLMEQLNQTKEDRDKGASKLEEVKKTLEQMINGGRVMSDTIAELEKTKA-EQDLAVNKLTKDNIE 1463
               ..|.:..:|..:||::.:   :||.:..:.|    |.:...|:|.. .::|.....| :|.:
Mouse  1218 ---RDLKKRLKDPAQGAAQWQ---RTLTEHHDAG----DGVLNPEETTVLSEELKWASRT-ENTK 1271

  Fly  1464 L---EKQCSKTQEQLQMESLTR 1482
            |   |::...:...|:.:.||:
Mouse  1272 LNGSEREVDNSSSSLKTQPLTQ 1293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 133/349 (38%)
Motor_domain 8..321 CDD:277568 129/342 (38%)
Smc <680..1449 CDD:224117 153/837 (18%)
TMPIT 779..>867 CDD:285135 22/100 (22%)
Smc 1042..1910 CDD:224117 88/466 (19%)
Kif27NP_780423.2 KISc_KIF4 4..342 CDD:276823 129/343 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 559..582 3/22 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 642..665 4/22 (18%)
Smc 721..>1096 CDD:224117 80/455 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 886..916 3/29 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1267..1319 7/28 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1325..1344
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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