DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and kif1ab

DIOPT Version :10

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:XP_009296795.1 Gene:kif1ab / 566766 ZFINID:ZDB-GENE-070912-480 Length:1799 Species:Danio rerio


Alignment Length:2195 Identity:467/2195 - (21%)
Similarity:785/2195 - (35%) Gaps:703/2195 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSIQVCIKVRPC---EPGLTSLW---------------QVKERRSIHLAD----SHAEPYVFDYV 49
            :|::|.::|||.   |.|..|..               |.||.:|.:. |    ||..|...:| 
Zfish     4 ASVKVAVRVRPFNSREIGKDSKCIIQMSGNTTTILNPKQPKENKSFNF-DYSYWSHTTPEDVNY- 66

  Fly    50 FDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMG--DEQNPGVMVLAAKEIFQ 112
                |..::|:..:.:.::....:|:|..|||||||.:||:|||||  ::...|::.|..:::|.
Zfish    67 ----ACQKQVYRDIGEEMLLHAFEGYNVCIFAYGQTGAGKSYTMMGKQEKDQEGIIPLLCEDLFT 127

  Fly   113 QISSETERD--FLLRVGYIEIYNEKIYDLLNKKNQ-DLKIHE---SGNGIVNVNCEECIITSEVD 171
            :|:...:.:  :.:.|.|:|||.|::.||||.||: :|::.|   .|..:.:::  :..:||..|
Zfish   128 KINDNNDNNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLMGPYVEDLS--KLAVTSYND 190

  Fly   172 LLRLLCLGNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQ-SVLNLVDLAGSERAD 235
            :..|:..|||.|||..|||||.||||||:|.||...::.|:..::...: |.::|||||||||||
Zfish   191 IQDLMDSGNKARTVAATNMNETSSRSHAVFNIIFTQKQHDNDSENTTEKVSKISLVDLAGSERAD 255

  Fly   236 QTGARGARLKEGGHINKSLLFLSNVIKSLSE--NADNR---------FTNYRDSKLTRILQASLG 289
            .|||:|.|||||.:|||||..|..||.:|:|  :|.|:         |..||||.||.:|:.:||
Zfish   256 STGAKGTRLKEGANINKSLTTLGKVISALAEMDSAPNKNKKKKKVESFIPYRDSVLTWLLRENLG 320

  Fly   290 GNAFTSIICTIKPSIM--EESQSTLSFATRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKL- 351
            ||:.|:::..:.|:.:  :|:.|||.:|.|||:||....:||..:: .:::.|:.|:..|||.| 
Zfish   321 GNSRTAMVAALSPADINYDETLSTLRYADRAKQIRCNAVINEDPNN-RLVRELKEEVARLKDLLY 384

  Fly   352 ----------------------AEEERKN------------------------------------ 358
                                  |..:|.:                                    
Zfish   385 AQGLGDIIENLSNYKANISSIQAVNQRGDFSTVTNAMTGMSPSPSLSALTSRVGSISSLHDRIMF 449

  Fly   359 --ENQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTT--ED--RI 417
              .:::.:|.|:     :..|||.  .|::..::|.|||.........| |||.|..  ||  .:
Zfish   450 SPGSEEAIERLK-----ETEKIIA--ELNETWEEKLRRTEAIRMEREAL-LAEMGVAMREDGGTV 506

  Fly   418 DQF--PKVSHL----PKPVFFH--------------TSNAGKRWDNI-------------PKTIN 449
            ..|  .|..||    ..|:...              ..:|..|.|.:             ..|.|
Zfish   507 GVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITKVGREDASSRQDIVLSGHFIKDEHCIFTSTTN 571

  Fly   450 ILGSLDIGTESNSISEEFLPAECIDFGSPRPDVLKPMLTI-------------------RQLPDL 495
            .:|...:..|....:|.::..:.:    ..|.|||....|                   |:....
Zfish   572 AIGEGTVVLEPCEGAETYVNGKRV----TEPTVLKSGNRIIMGKSHVFRFNDPEQARQDRERTPC 632

  Fly   496 PLTPKGPLTTDKIKKEI---------QDL-QMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLE 550
            ..||..|:.....::|:         |:: |....||..:..|.||...|             ||
Zfish   633 ADTPVEPVDWAFAQRELLEKQGIDMKQEMDQRLQELEDQYRKEREEASNL-------------LE 684

  Fly   551 QESLAEKERYDALEKEVTSLRADNEAANSKISELEEKLSTLKQTMRIMEVENQVAVGLEFEFEAH 615
            |:.|..:.:.:||:|:|.| |...|....: .|||:::...|:       |.::|:....::..:
Zfish   685 QQRLDYESKLEALQKQVNS-RYYPETTEEE-EELEDEVPWTKR-------ETELALWAFRKWRFY 740

  Fly   616 KKSSKLRVDDLL--SALLEKESTIES--LQKSLD---NLTRDVLRNSKEGHMLSIAPEQEDIAGD 673
            :.:| ||  |||  :|:..||:...|  |:|.:.   .|..|.|          .:|...|:...
Zfish   741 QFTS-LR--DLLWGNAIFLKEANAISVELKKKVQFQFVLLTDTL----------YSPLPPDLLPP 792

  Fly   674 SICNKCEELEK-------LIADLESKKNSCECDQLRLEIVSVRDKLESVESAFNLASSEIIQKAT 731
            ||   .::.||       :..:::.:||.                                  ||
Zfish   793 SI---AKDREKRLFPRTIVAVEVQDQKNG----------------------------------AT 820

  Fly   732 DCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHEKHEHVQEKYQKLQEEYE--QLES 794
            ....|.|           |::|.|.:.:.:.......:|..|..:|:........:.:.  :|..
Zfish   821 HYWTLDK-----------LRQRLDLMREMYDRAAEVPSTAVEDCDHIMSGGDPFYDRFPWFRLVG 874

  Fly   795 RARSASSAEFQRLQNDNTKFQADIASLNERLEEAQNMLTEVQNSESTVEKLRIQNHELTAKIKEL 859
            |....::...:|:..         .:|:..|.:..:.:||:.: |....|:.::..||.....|:
Zfish   875 RTPILNTCMSERMSG---------LTLSPTLSDPDSDITELAD-ERHYGKVEVEEEELEDLDDEI 929

  Fly   860 --ETNFEEMQREYDCLSNQLMESVQENDALREEIKQRPTSHVEESMRSSGIS---SDFDEQKQDI 919
              |.|..|:.||         |...::|.:.|              |..|:|   ..|.::....
Zfish   930 FVEDNGSELGRE---------EEEDDDDGVGE--------------RCPGVSDGQDPFYDRWPLF 971

  Fly   920 NLL-HQFVQLSESVQQIELQHHSGISRLFRANQMKLDQSEPGLKLCLESAEYIEEDNRQSDATEP 983
            :|: ..||.||..:..:.|.|...|            .||.|.                      
Zfish   972 SLVGRAFVYLSNLLYPVPLVHRVAI------------VSEKGE---------------------- 1002

  Fly   984 ICLKGFLKRHRFQIKRLS--QEHVDMGEEKRLLDI--ISQLEQEIEEKSALMEATEATINEMREQ 1044
              :||||   |..::.:|  :|..|.|...|....  ||..:|..|:..     |||..:.|.:.
Zfish  1003 --VKGFL---RVAVQAISADEEAPDYGSGVRQSGTAKISFEDQAFEKFQ-----TEACTSGMSQT 1057

  Fly  1045 MTNLESALLEKSVIINKVEDYQRQIESLEKQNAEMTMVYEELQDRVTRESSMSESLLRVPPDEDT 1109
            .|:               |:..|.:|. |.||:|:.:..:|:.:..                   
Zfish  1058 HTS---------------EEELRIVEG-EGQNSELGLSADEVNNNT------------------- 1087

  Fly  1110 LPGCPTSPSRREQEVATLKTSITELQSQVSD--LKAELENHLRQIQLKDGNIARLQTDFEEMSER 1172
               |..||                   .:||  ||..||..|...|.|.....::.::|      
Zfish  1088 ---CLVSP-------------------DISDSPLKGVLECPLDVTQDKSLQHLKIGSNF------ 1124

  Fly  1173 CLSMEVRLAELDEDTKQKQELLDRQAQKLS----DDLCLIDQLQKKNAQLVEQ------------ 1221
                ..|:..|             ||..:|    |..|..:.:.:.:.....:            
Zfish  1125 ----TFRVTVL-------------QASSISAEYADIFCQFNFIHRHDEAFSTEPLKNTGRGPPLG 1172

  Fly  1222 -YH------KATES-LSLADAKPDQILLSSQYDSQIEKLNQLLNAAKDELHDVRRIKDDEISALR 1278
             ||      :.|:| :....::|....:...|..|     ......||.:..:|        .:|
Zfish  1173 FYHVQNITVEVTKSFVEYIKSQPIVFEVFGHYQKQ-----PFPPLCKDLISSLR--------PMR 1224

  Fly  1279 MEFLLQIETNEKENQAKFYAELQETKDRYESNVAELKEKLLQVEETLSSVTVRCQAELEALKSAH 1343
            .:|...:..::.....|.     .|..|..:.....|..|:...|.       |:.|      |:
Zfish  1225 RQFPRVMPLSKPVPATKL-----STLARSTAGPCHCKYDLMAFFEI-------CELE------AN 1271

  Fly  1344 KENISQAVEERNNL-----IVQHQAEMETIRETLKNKLAEASTQQSKMEDAFRAEINEVRATLME 1403
            .:.|...|:.|..:     .:.||.....|..|:.:            |.....|..||:..::.
Zfish  1272 GDYIPAVVDHRGGMPCHGTFLLHQGIQRRITVTIAH------------ETGNDIEWKEVKELVIG 1324

  Fly  1404 QLNQTKE-DR---DKGASKL-----EEVKKTLEQMINGGRVMSD--TIAELE---KTKAEQDLAV 1454
            ::..|.| |.   |.....|     ..::.|.:..::.|   ||  |....|   .:.....|.:
Zfish  1325 RIRNTPEADETIIDPNILSLNILSSNYIRPTYDDRVSLG---SDHRTFYRFEAAWDSSMHNSLLL 1386

  Fly  1455 NKLTKDNIELEKQCSKTQEQLQMESLTRDQI---SFEIEAHIKKLELIVASSKKRIIE------L 1510
            |::|...   ||........|:||:.|:..:   .|.:..:.:..:|..:.|.:.:..      |
Zfish  1387 NRVTPYG---EKIYITLSAYLEMENCTQPTVVTKDFCMVFYSRDAKLPASRSIRNLFSTGAFRPL 1448

  Fly  1511 EEKCDQQVLELDKCRLEKLSLESEIQKANSEHSCTMEKLQELQAEMKVLSNRNEKEKC------- 1568
            |..|...|.||..|.|..:.            |..|::.:....:..|...|.|:...       
Zfish  1449 ESNCVTGVYELSLCHLADIG------------SPGMQRRRRRVLDTSVAYVRGEENLAGWRPRSD 1501

  Fly  1569 ----DFETKLETFTFKITDLEEVLKEAQHKVILYDD-----LVSQHERLKICLAEANELSSNLQK 1624
                |.:.:||    |::.|:|| ::.:|.::|.:.     |:.|.......|.::.:.:|.:..
Zfish  1502 SLILDHQWELE----KLSLLQEV-EKTRHYLLLREKLEASLLLGQDSFYGKDLLDSPKANSPMIS 1561

  Fly  1625 KVMSLHTELIDSQKGISSRDVEINELREELKAAMDAKATASAEQMTLVTQLKDVEERMANQAEKF 1689
            .||||         |:.|.    ||.:.||.|                   |.|...|    ..|
Zfish  1562 PVMSL---------GLDSP----NERQRELAA-------------------KCVRLLM----HTF 1590

  Fly  1690 TREAANLKGSINELLLKLNSMQETKDMLESGNEELKEQLRNSQNLRNMLDEESKMCISLKEKLVK 1754
            .|:.:.:..|::|..|...|....:|.:.|....|               ..|..|.||.:....
Zfish  1591 NRQYSQVSSSLSESKLSEISASLLRDSVTSPLSSL---------------TPSSTCPSLLDGHYS 1640

  Fly  1755 LE----DAKTSLEQQLRDNKSEIYQRHTELTKEVELGRNRIGELTKKCEELCSDLENSDQIRLDL 1815
            .:    :|.:.......|..|.|.::                      ...|:.:.|..:||:..
Zfish  1641 TDLRGAEANSGASSPDLDPFSPIERK----------------------PRTCTFIPNIQEIRVSP 1683

  Fly  1816 QETKEQLKKTLE-NNLGWQQKVDEVTRECEKL---RFDMQSKEVQNESKVQELISE--------- 1867
            ..:|:.....|| :..||.::...|.|....|   ..|...:.:.|.|..|...||         
Zfish  1684 IVSKKGYLHFLEPHTSGWVKRYIVVRRPYVYLYRSERDYVERAIINLSSAQVEYSEDHHTLMRAP 1748

  Fly  1868 -----CEELRSTLKSKEASFQSEKESMD----------RTISSLLEDKRN 1902
                 |.|.|:.|    ....::||..|          .||.|.|..:::
Zfish  1749 NTFTVCTEHRNIL----LQATNDKEMHDWLYAFNPLLAGTIRSKLSRRKS 1794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 Motor_domain 8..321 CDD:473979 134/356 (38%)
SMC_prok_B 539..1431 CDD:274008 170/957 (18%)
SMC_prok_B 1137..1926 CDD:274008 158/868 (18%)
YhaN 1717..2182 CDD:443752 39/218 (18%)
kif1abXP_009296795.1 KISc_KIF1A_KIF1B 4..361 CDD:276816 136/364 (37%)
Kinesin_assoc 358..538 CDD:465047 32/188 (17%)
FHA 514..628 CDD:469597 16/117 (14%)
ERM_helical 647..>702 CDD:466641 16/67 (24%)
KIF1B 828..875 CDD:463574 7/46 (15%)
DUF3694 1273..1428 CDD:463599 32/172 (19%)
PH_KIFIA_KIFIB 1680..1782 CDD:269939 22/105 (21%)

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