DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmet and kif5ba

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:XP_005171465.1 Gene:kif5ba / 563459 ZFINID:ZDB-GENE-070629-2 Length:969 Species:Danio rerio


Alignment Length:1048 Identity:292/1048 - (27%)
Similarity:461/1048 - (43%) Gaps:256/1048 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EPYVFDYVFDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMG---DEQNPGVM 103
            :|||||.||....:.::|:...|:.||...:.|:|||||||||||||||:||.|   |....|::
Zfish    44 KPYVFDRVFQSNTTQEQVYTACAQQIVKDVLAGYNGTIFAYGQTSSGKTHTMEGNLHDTDGMGII 108

  Fly   104 VLAAKEIFQQISSETER-DFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNV-NCEECII 166
            ....::||..|.|..|. :|.::|.|.|||.:||.|||:....:|.:||..|.:..| .|.|..:
Zfish   109 PRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFV 173

  Fly   167 TSEVDLLRLLCLGNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGS 231
            .|..:::..:..|...|.|..|||||.|||||:||.|.:   |.:::..:..:...|.|||||||
Zfish   174 CSPEEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINV---KQENTQTEQKLSGKLYLVDLAGS 235

  Fly   232 ERADQTGARGARLKEGGHINKSLLFLSNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTSI 296
            |:..:|||.||.|.|..:|||||..|.|||.:|:|.  :.:..|||||:|||||.|||||..|:|
Zfish   236 EKVSKTGAEGAVLDEAKNINKSLSSLGNVISALAEG--STYVPYRDSKMTRILQDSLGGNCRTTI 298

  Fly   297 ICTIKPSIMEESQ--STLSFATRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERKNE 359
            :....||...|::  |||.|..|||.|:....||..::.....|:.|:          |.||...
Zfish   299 VICCSPSAFNEAETKSTLMFGQRAKTIKNTVCVNVELTAEQWKKKYEK----------ERERNKS 353

  Fly   360 NQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPKVS 424
            .:..:..||.::..                      |         ...||...|::.|: .|| 
Zfish   354 LRNTITWLENELNR----------------------W---------RNGETVPAEEQYDK-EKV- 385

  Fly   425 HLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDFGS-----PRPDVLK 484
                       ||           .:| :||     |:|:.:       .|.|     |.|.:|.
Zfish   386 -----------NA-----------EVL-ALD-----NTINND-------KFASTPSMPPMPGMLG 415

  Fly   485 PMLTIRQLPDLPLTPKGPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNL 549
            ..||               ..:|.|.|::..:::..|:...| |..:...|.|||     ::..|
Zfish   416 TRLT---------------GVEKDKCEVELGKLYKQLDDKDE-EINQQSQLVEKL-----KQQML 459

  Fly   550 EQESLAEKER--YDALEKEVTSLRADNEAANSKISELEEKLSTL--KQTMRIMEVENQVAVGLEF 610
            :||.|....|  :|.|:.|:|.|:.:|||:..::.|:.:.|..|  ....:..|||::..     
Zfish   460 DQEELLASSRRDHDNLQAELTRLQLENEASKEEVKEVLQALEELAVNYDQKSQEVEDKTK----- 519

  Fly   611 EFEA------HKKSSKLRVDDLLSALLE-----KESTIESLQKSLDNLT--------RDVLRNSK 656
            ||||      .|.|:...:|..|..|.|     |:...|.:...|.:||        .|:.::..
Zfish   520 EFEALSEELSQKSSTLASIDSELQKLKEMANHQKKRVTEMMSSLLKDLTEIGIAVGNNDIKQHEG 584

  Fly   657 EGHM--------LSIAPEQEDIAGDSICNKCEELEKLIADLESKKNSCECD------QLRL---- 703
            .|.:        |.|:..:.::  .|:..:|::||.  ...||.|...|.|      |||:    
Zfish   585 SGLIDEEFTVARLYISKMKSEV--KSMVKRCKQLEN--TQSESNKKMDESDKELAACQLRISQHE 645

  Fly   704 -EIVSVRDKLESVESAFNLASSEIIQKATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAG 767
             :|.|:.:.|::||           ||..                 ||:|..|:|:::.....| 
Zfish   646 AKIKSLTEYLQNVE-----------QKKR-----------------QLEEDVDSLNEELVKISA- 681

  Fly   768 ITTLHEKHEHVQEKYQKLQEEYEQLESRARSASSAEFQRLQNDNTKFQADIASLNERLEEAQNML 832
                       |||...:::|.| ::| |.....|..:::|:.....|..|:||.:.||..:.::
Zfish   682 -----------QEKVHAMEKESE-IQS-ANEVKEAVEKQIQSHREAHQKQISSLRDELETKEKLI 733

  Fly   833 TEVQNSESTV----EKLRIQNHEL-------TAKIKEL---ETNFEEMQREYDCLSNQLMESVQE 883
            |::|:....:    |:||:::.:|       :.|:.||   :...|:.:::...|...:.:.:|.
Zfish   734 TDLQDQNQKIMLEQERLRVEHEKLKSTDQEKSRKLHELTMMQDRREQARQDLKGLEETVAKELQT 798

  Fly   884 NDALREEIKQRPTSHVEESMRSSGISSDFDE------QKQDINLL-HQFVQLSESVQQI------ 935
            ...||:...|...:.|::|     ...|.||      |||.|:.| :...||::..:|:      
Zfish   799 LHNLRKLFVQDLATRVKKS-----AEMDSDETGGSAAQKQKISFLENNLEQLTKVHKQLVRDNAD 858

  Fly   936 ---ELQHHSGISRLFRANQMKLDQSEPGLKLCLESA-----EYIEEDNRQSDATEPICLKGFLKR 992
               ||..   :.:..||...::...|..||...|:|     .|.:|.:|..:|   :..|...:|
Zfish   859 LRCELPK---LEKRLRATAERVKALETALKEAKENAARDRKRYQQEVDRIKEA---VRAKNMARR 917

  Fly   993 -HRFQIKR 999
             |..||.:
Zfish   918 GHSAQIAK 925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 128/292 (44%)
Motor_domain 8..321 CDD:277568 127/285 (45%)
Smc <680..1449 CDD:224117 84/367 (23%)
TMPIT 779..>867 CDD:285135 25/101 (25%)
Smc 1042..1910 CDD:224117
kif5baXP_005171465.1 KISc_KHC_KIF5 6..325 CDD:276820 127/285 (45%)
KISc 9..332 CDD:214526 128/292 (44%)
COG5281 <305..>569 CDD:227606 83/367 (23%)
DUF4337 <467..>536 CDD:290935 21/73 (29%)
TACC 474..679 CDD:282818 56/241 (23%)
TMPIT 603..>691 CDD:285135 28/131 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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