DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmet and kif18a

DIOPT Version :10

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_956533.1 Gene:kif18a / 393209 ZFINID:ZDB-GENE-040426-862 Length:895 Species:Danio rerio


Alignment Length:925 Identity:244/925 - (26%)
Similarity:408/925 - (44%) Gaps:181/925 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSIQVCIKVRPCEPGLTSLWQVKE-----RRSIHLADSHA---EP-------------------- 43
            |.::|.::|||...        ||     ::.:|:.|:|.   :|                    
Zfish     8 SHVKVVVRVRPLND--------KEKDGNFKKVVHVVDNHMLVFDPKEEEVTFFRGQRVGNRDVRK 64

  Fly    44 -------YVFDYVFDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGDEQNPG 101
                   :|||.||.|.:|..|||:...|.||...:.|:|.|:||||.|.:|||:||:|...:||
Zfish    65 RANKDLKFVFDSVFGEESSQIEVFENTTKAIVDGVLNGYNCTVFAYGATGAGKTHTMLGTSNSPG 129

  Fly   102 VMVLAAKEIFQQIS-SETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESG-NGIVNVNCEEC 164
            ||.|..||:|.::. .:.::.|.:...|:|:|||:|.|||.... .|.:.|.| ||:|.......
Zfish   130 VMFLTMKELFARMDLIKEDKVFNVAFSYLEVYNEQIRDLLTNSG-PLAVREDGSNGVVVQGLTLH 193

  Fly   165 IITSEVDLLRLLCLGNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLA 229
            ...|...:|..|..||:.||...|:||..||||||:|:|.:..:....|.:..|..:.::|:|||
Zfish   194 QPKSAEHILEALDYGNRNRTQHPTDMNATSSRSHAVFQIYLRQQDKTASLNPNVRVAKMSLIDLA 258

  Fly   230 GSERADQTGARGARLKEGGHINKSLLFLSNVIKSLSENADNRFTN--YRDSKLTRILQASLGGNA 292
            |||||..|..:||||:||.:||:|||.|.|||.:|: |...:.|:  ||||||||:|:.|||||.
Zfish   259 GSERASATNTKGARLREGANINRSLLALGNVINTLA-NPKCKKTHIPYRDSKLTRLLKDSLGGNC 322

  Fly   293 FTSIICTIKPSIM--EESQSTLSFATRAKKIRIKPQVNEMVSD------ATMMKRLEREIKVLKD 349
            .|.:|..:.||.:  |::.:||.:|.|||:|:...:.|.|..|      |.:.::.:.||.:||.
Zfish   323 RTVMIANVSPSSLSYEDTHNTLKYANRAKEIKSTLRSNVMSLDSHIGQYAIICEKQKAEIVMLKQ 387

  Fly   350 KLAE-EERKNE-------NQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLE 406
            ||.| ||||.|       :.||....|: :...:..:     .||:.:.::          .||:
Zfish   388 KLKEYEERKAEAPALNPISIQKRAEFEK-MSESLRSV-----FSDRLKLRK----------EHLD 436

  Fly   407 LAETGTTEDRIDQFPKVS-HLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPA 470
            : |....|.|:....:.| |....:||..:.|.:......:.:..|.|     ....:.:..:.:
Zfish   437 I-EKQLNESRLTMRHRESWHQQSLIFFPDNKAERATCKYERKLASLKS-----HQEHLQQRLMES 495

  Fly   471 E-CIDFGSPRPDVLKPMLTIRQLP-DLPLTPKGPLTTDKIKKEIQ--DLQM-FTSLEKHFE---- 526
            | |......         .:.::. ::.|......|.:::|||:|  .||: .:.|::|.|    
Zfish   496 EKCFQENEG---------WLHRIENEMKLLGHDGHTPEELKKELQCHQLQLQISDLQQHMEHMSH 551

  Fly   527 -VECEEVQGL-KEKLAEV---TAQRDNLEQESLA---EKERYDALEKEVTSLR----ADNEAANS 579
             :..::.:.. ..||...   |.:|.:|..::::   :...::.||:.|...|    ||.|.|..
Zfish   552 LISVQDQENTHTHKLVNALLSTCRRQHLALKAMSADGDGSEWEELERLVHRERAVVWADQEKAED 616

  Fly   580 KISELEEKLSTLKQTMRIMEVENQVAVGLEFEFEAHKKSSKLR----------------VDDLLS 628
            |..:.....:.|:..:....:.:..:.....|....:.|.:||                .:.:|.
Zfish   617 KRDDSGIGSTHLRPILSFSHLVSHQSTPCSSEKHTRRTSQRLRPTHSSKDCGPHHQVAEAEGVLK 681

  Fly   629 ALLEKESTIESLQKSLDNLT--------RDVLRNSKEGHM-LSIAPEQE-------------DI- 670
            ..:.::.::...:...|...        :||||  :||.. |...||.:             || 
Zfish   682 KPIRRKLSVSPAKLDGDGPVLSHHPPDLQDVLR--QEGMFPLQFTPEGQPHTSSIFDPNSTIDIG 744

  Fly   671 -------AGDSICNKCEE-----LEKLIADLESKKNSCECDQLRLEIVSVRDKLESVESAFNLAS 723
                   |..:|....|:     |:.|.|:..:|..:      ||||.|:.|...|..|...:.|
Zfish   745 HIEDPTGANATIILSPEDPGRSTLQALRANNANKPAN------RLEIPSLLDLRRSKPSYMAMTS 803

  Fly   724 SEIIQKATDCERLSKELSTSQNAFGQLQERYDALD--QQWQAQQAGITTLHEKHEHVQEKYQKLQ 786
            :...::..:|..:.||.|:...|....:.:.|..:  :..:.::.|:::.:|....|.....  :
Zfish   804 AAQGKRKLNCSSIGKEDSSQAMAAAPKRIKRDPCEASKPLRIRRLGVSSENEPSRRVVRSVS--E 866

  Fly   787 EEYEQLESRARSASS 801
            ....||..|....||
Zfish   867 GNLHQLGRRKHKLSS 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 Motor_domain 8..321 CDD:473979 134/353 (38%)
SMC_prok_B 539..1431 CDD:274008 61/326 (19%)
SMC_prok_B 1137..1926 CDD:274008
YhaN 1717..2182 CDD:443752
kif18aNP_956533.1 KISc_KIP3_like 9..353 CDD:276821 134/353 (38%)
SMC_N <345..572 CDD:481474 53/257 (21%)
Blue background indicates that the domain is not in the aligned region.

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