DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and Klp61F

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_476818.1 Gene:Klp61F / 38135 FlyBaseID:FBgn0004378 Length:1066 Species:Drosophila melanogaster


Alignment Length:1216 Identity:297/1216 - (24%)
Similarity:516/1216 - (42%) Gaps:258/1216 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KNASSIQVCIKVRP------CEPGLTSLWQVKERRSI--HLADSH-AEPYVFDYVFDEGASNQEV 59
            |:..:|||.::|||      |......:..|..|..:  |..||. .:.:.||..|...:...:|
  Fly    15 KSNQNIQVYVRVRPLNSRERCIRSAEVVDVVGPREVVTRHTLDSKLTKKFTFDRSFGPESKQCDV 79

  Fly    60 FDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMG-----------DEQNPGVMVLAAKEIFQQ 113
            :..:...::...:.|:|.|:||||||.:|||:||:|           |:.:.|::..|...:|.:
  Fly    80 YSVVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSHLFDE 144

  Fly   114 ISSETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIH------ESGNGIVNVNCEECIITSEVDL 172
            :.. .|.::.:|:.|:|:|||::.|||: .:...||.      :.|:.|:. ..||..:.|:.|:
  Fly   145 LRM-MEVEYTMRISYLELYNEELCDLLS-TDDTTKIRIFDDSTKKGSVIIQ-GLEEIPVHSKDDV 206

  Fly   173 LRLLCLGNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGSERADQT 237
            .:||..|.:.|....|.||.:|||||.:|.|::..|::....:|.:....||||||||||...:.
  Fly   207 YKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKA 271

  Fly   238 G-ARGARLKEGGHINKSLLFLSNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTSIICTIK 301
            | .:|.|::|..:||:|||.|..||.:|.:.|.:  ..||:|||||:||.||||...||||.||.
  Fly   272 GNEKGIRVRETVNINQSLLTLGRVITALVDRAPH--VPYRESKLTRLLQESLGGRTKTSIIATIS 334

  Fly   302 P--SIMEESQSTLSFATRAKKIRIKPQVNEMVSDATMMK-------RLEREIKVLKDK----LAE 353
            |  ..:||:.|||.:|.|||.|:.||:||:.::..|::|       :|:|::...:||    || 
  Fly   335 PGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTKKTVLKEYTEEIDKLKRDLMAARDKNGIYLA- 398

  Fly   354 EERKNENQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRID 418
            ||...|...|:|...|::.   .|::...:|.|:.|.| .:.:...:.....:..|...||:.:.
  Fly   399 EETYGEITLKLESQNRELN---EKMLLLKALKDELQNK-EKIFSEVSMSLVEKTQELKKTEENLL 459

  Fly   419 QFPKVSHLPKPVFFHTSNAGKRWDNI------------PKTINILGSLDIGT----------ESN 461
            .......|.|.|...|....|....:            .:...||.:.|:.|          |..
  Fly   460 NTKGTLLLTKKVLTKTKRRYKEKKELVASHMKTEQVLTTQAQEILAAADLATDDTHQLHGTIERR 524

  Fly   462 SISEEFLPAECIDFGSPRPDVLKPM---LTIRQLPDLPLTPKGPLTTDKIKKEIQDLQMFTSLEK 523
            ...:|.:...|..|.....|.|:.:   |.:.|  |.....|..|:.:.:.......::..:..|
  Fly   525 RELDEKIRRSCDQFKDRMQDNLEMIGGSLNLYQ--DQQAALKEQLSQEMVNSSYVSQRLALNSSK 587

  Fly   524 HFEVECEEVQGLKEKLAEVTAQRDNLEQESLAEKERYDALEKEVTSLRADNEAANSKISELEEKL 588
            ..|:       |||..|:....:.||..:.:.|            .::..::.:.:.:::|.|::
  Fly   588 SIEM-------LKEMCAQSLQDQTNLHNKLIGE------------VMKISDQHSQAFVAKLMEQM 633

  Fly   589 STLKQTMRIMEVENQVAVGLEFEFEAHKKSSKLRVDDLLSALLEKESTIESLQKSLDNLTRDVLR 653
            .. :|.:...|::..:.| :|...:.||.        :|.::.||.:||      :|:..:.|..
  Fly   634 QQ-QQLLMSKEIQTNLQV-IEENNQRHKA--------MLDSMQEKFATI------IDSSLQSVEE 682

  Fly   654 NSKEGHMLSIAPEQEDIAGDSICNKCEELEKLIADLESKKNSCECDQLRLEIVSVRDKLESVESA 718
            ::|:.|     .:.|.:...|:.: .|||:.|..:|.:::...:.:...||  |:..::|.::  
  Fly   683 HAKQMH-----KKLEQLGAMSLPD-AEELQNLQEELANERALAQQEDALLE--SMMMQMEQIK-- 737

  Fly   719 FNLASSEIIQKATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHEKHEHVQEKYQ 783
             ||.|...|..:....::.:...|..:       |.|.:       ::||           :.||
  Fly   738 -NLRSKNSISMSVHLNKMEESRLTRNH-------RIDDI-------KSGI-----------QDYQ 776

  Fly   784 KLQEEYEQLESRARSASSAEFQRLQNDN-----TKFQADIASLNERLEEAQNMLTEVQNSESTVE 843
            ||..|..| .::|...|..|...|..|.     :..|..:.:||::.|:..|         ..|.
  Fly   777 KLGIEASQ-SAQAELTSQMEAGMLCLDQGVANCSMLQVHMKNLNQKYEKETN---------ENVG 831

  Fly   844 KLRIQNHELTAKIKELETNFEEMQREYDCLSNQLMESVQENDALREEIKQRPTSH-------VEE 901
            .:|:.::::....:|.:...|.:|.:.:....|::::.|:   |..|.:||...|       |:|
  Fly   832 SVRVHHNQVEIICQESKQQLEAVQEKTEVNLEQMVDARQQ---LITEDRQRFIGHATVATDLVQE 893

  Fly   902 SMRSSGISSDFDEQKQDINLLHQFVQLSESV--QQIELQHHSGISRLFRANQMKLDQSEPGLKLC 964
            |.|.  .|...:.|:|.:.:..|     |.|  ||.||:.::...    ....|.|...|     
  Fly   894 SNRQ--FSEHAEHQRQQLQICEQ-----ELVRFQQSELKTYAPTG----TTPSKRDFVYP----- 942

  Fly   965 LESAEYIEEDNRQSDATEPICLKGFLKRHRFQIKRLSQEHVDMGEEKRLLDIISQLEQEIEEKSA 1029
                       |...||.|         |:..::|..|| :|..:    ||              
  Fly   943 -----------RTLVATSP---------HQEIVRRYRQE-LDWSD----LD-------------- 968

  Fly  1030 LMEATEATINEMRE-----QMTNLESALLEKSVIINKVEDYQRQIESLE----------KQNAEM 1079
                |.|||:|..|     .|.:::. |.|...|:|..     .||.::          .:|:..
  Fly   969 ----TTATIDECSEGEHDVSMHSVQE-LSETETIMNST-----PIEPVDGVTVKRGCGTTRNSNS 1023

  Fly  1080 TMVYEELQDRVTRESSMSESLLRVPPDEDTLPGCPTSPSRREQEVA 1125
            ..:...:.....|.||:|.||   .|.:.:..|.|......::.||
  Fly  1024 NALKPPVATGGKRSSSLSRSL---TPSKTSPRGSPAFVRHNKENVA 1066

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 125/348 (36%)
Motor_domain 8..321 CDD:277568 122/341 (36%)
Smc <680..1449 CDD:224117 99/475 (21%)
TMPIT 779..>867 CDD:285135 20/92 (22%)
Smc 1042..1910 CDD:224117 20/99 (20%)
Klp61FNP_476818.1 KISc_BimC_Eg5 17..365 CDD:276815 127/352 (36%)
Kinesin 25..356 CDD:278646 119/335 (36%)
Microtub_bind 923..>1009 CDD:290642 29/143 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437923
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.