DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmet and unc-104

DIOPT Version :10

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_611155.3 Gene:unc-104 / 36876 FlyBaseID:FBgn0267002 Length:1739 Species:Drosophila melanogaster


Alignment Length:211 Identity:34/211 - (16%)
Similarity:71/211 - (33%) Gaps:67/211 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLIILDTAEYVGEWSAKY----------VMKRINDFKPGPDRYFTLGLPTGSTPLGMYRHLIKF 55
            ::||..:.:..|.|::.||          |:.:.|..:.. |..|          |...|.:.:.
  Fly   223 IKLITEEASNRVAEYAFKYAKDNNRKKVTVVHKANIMRMS-DGLF----------LRCCRDMAQK 276

  Fly    56 HQQGRISFKYVKTFNMDEYVDLPRDHPESYHYFMWHNFFKHIDIDP------------------- 101
            :.:.:...:|:.|..::...|     |..|...:..|.:..|..|.                   
  Fly   277 YPEIKFEERYLDTVCLNMVQD-----PRKYDVLVMPNLYGDILSDMCAGLVGGLGLTPSGNMGLN 336

  Fly   102 ----ENVHILDGNAPDLVAECDAFEEKIRAAGGIELFIGGIGPDGHIAFNEPGSSLASRTRVKTL 162
                |:||   |.|||:..:        ..|....|.:..:....|:..|:...      ::::.
  Fly   337 GALFESVH---GTAPDIAGK--------DLANPTALLLSAVMMLRHMELNQHAD------KIQSA 384

  Fly   163 AQDTLEANARFFGNDI 178
            ..:|:: .|::...|:
  Fly   385 CFETIK-EAKYLTGDL 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 Motor_domain 8..321 CDD:473979 32/204 (16%)
SMC_prok_B 539..1431 CDD:274008
SMC_prok_B 1137..1926 CDD:274008
YhaN 1717..2182 CDD:443752
unc-104NP_611155.3 KISc_KIF1A_KIF1B 2..358 CDD:276816 28/161 (17%)
Kinesin_assoc 355..498 CDD:465047 7/52 (13%)
FHA_KIF1 474..574 CDD:438757
YhaN <575..>666 CDD:443752
KIF1B 878..924 CDD:463574
DUF3694 1199..1347 CDD:463599
PH_KIFIA_KIFIB 1602..1704 CDD:269939
Blue background indicates that the domain is not in the aligned region.

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