DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmet and Khc

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster


Alignment Length:1249 Identity:302/1249 - (24%)
Similarity:502/1249 - (40%) Gaps:379/1249 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAKN----ASSIQVCIKVRP---CEPGLTSLWQVK-----ERRSIHLADSHAEPYVFDYVFDEG 53
            |||:.    ..||:|..:.||   .|....|.:.||     |...|.:|   .:.|:||.||...
  Fly     1 MSAEREIPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIA---GKVYLFDKVFKPN 62

  Fly    54 ASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTM---MGDEQNPGVMVLAAKEIFQQI- 114
            ||.::|::..||.||...:.|:|||||||||||||||:||   :||....|::.....:||..| 
  Fly    63 ASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIY 127

  Fly   115 SSETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNV-NCEECIITSEVDLLRLLCL 178
            :.|...:|.::|.|.|||.:||.|||:....:|.:||..|.:..| ...|..::|..|:..::..
  Fly   128 AMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEE 192

  Fly   179 GNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGSERADQTGARGAR 243
            |...|.:..|||||.|||||::|.|.:   |.::.::...:...|.||||||||:..:|||.|..
  Fly   193 GKSNRHIAVTNMNEHSSRSHSVFLINV---KQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTV 254

  Fly   244 LKEGGHINKSLLFLSNVIKSLSENADNRFTN--YRDSKLTRILQASLGGNAFTSIICTIKPSIME 306
            |.|..:|||||..|.|||.:|   ||...|:  |||||||||||.||||||.|:|:....|:...
  Fly   255 LDEAKNINKSLSALGNVISAL---ADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFN 316

  Fly   307 ESQ--STLSFATRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERKNENQQKVEHLER 369
            ||:  |||.|..|||.::....|||.::.....:|.|:          |:|:....:.|||.||.
  Fly   317 ESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEK----------EKEKNARLKGKVEKLEI 371

  Fly   370 QIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPKVSHLPKPVFFHT 434
            ::.    :...|.::..:.|.........:.....:|.|:|...|..:                 
  Fly   372 ELA----RWRAGETVKAEEQINMEDLMEASTPNLEVEAAQTAAAEAAL----------------- 415

  Fly   435 SNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDFGSPRPDVLKPMLTIRQLPDLPLTP 499
              |.:|    ....|:..|:.:..::.      |..||                           
  Fly   416 --AAQR----TALANMSASVAVNEQAR------LATEC--------------------------- 441

  Fly   500 KGPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLEQESLAEKER--YDA 562
                  :::.:::.|      .::....:.:..:.|||::         :|||.|....|  |:.
  Fly   442 ------ERLYQQLDD------KDEEINQQSQYAEQLKEQV---------MEQEELIANARREYET 485

  Fly   563 LEKEVTSLRADNEAANSKISELEEKLSTLKQTMRIMEVENQVAVGLEFEFEAHKKSSKLRVDDLL 627
            |:.|:..::.:||:|..::.|:                                           
  Fly   486 LQSEMARIQQENESAKEEVKEV------------------------------------------- 507

  Fly   628 SALLEKESTIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQEDIAGDSICNKCEELEKLIADLESK 692
                                                               .:.||:|..:.:.|
  Fly   508 ---------------------------------------------------LQALEELAVNYDQK 521

  Fly   693 KNSCECDQLRLEIVSVRDKLESVESAFNLASSEIIQKATDC-----ERLSKELSTSQNAFGQLQE 752
              |.|.|....:|.::.::|:..:|.||.||:| :|:..|.     :|:::.|:......|::.:
  Fly   522 --SQEIDNKNKDIDALNEELQQKQSVFNAASTE-LQQLKDMSSHQKKRITEMLTNLLRDLGEVGQ 583

  Fly   753 RY----DALDQQWQAQQAGITTLHEKHEHVQEKYQKLQEEYEQLESRARSASSAEFQRLQNDNTK 813
            ..    .::|.:..| .||...     ..|:|.:...:....::::.|::.:    ||..|..|:
  Fly   584 AIAPGESSIDLKMSA-LAGTDA-----SKVEEDFTMARLFISKMKTEAKNIA----QRCSNMETQ 638

  Fly   814 FQADIASLNERLEEAQNMLTEVQNSESTVEKLRIQNHELTAKIKELETNFEEMQREYDCLSNQLM 878
             |||   .|:::.|.:..|.|.        :|.|..||  |::|.|:.:..|.:.:...|..|: 
  Fly   639 -QAD---SNKKISEYEKDLGEY--------RLLISQHE--ARMKSLQESMREAENKKRTLEEQI- 688

  Fly   879 ESVQENDALREE-IKQRPTSHV-----EESMRSSGISSDFDEQKQDINLLHQFVQLSESVQQIEL 937
                  |:|||| .|.:...||     ||..|:..:.|.||.|..::...|. .|:||...:|..
  Fly   689 ------DSLREECAKLKAAEHVSAVNAEEKQRAEELRSMFDSQMDELREAHT-RQVSELRDEIAA 746

  Fly   938 QHHSGISRLFRANQMKLDQSEPGLKLCLE----SAEYIEEDNRQSDATEPICLKGFLKRHRFQIK 998
            :.|       ..::||    :...||.|.    :|:|  |..||.||                  
  Fly   747 KQH-------EMDEMK----DVHQKLLLAHQQMTADY--EKVRQEDA------------------ 780

  Fly   999 RLSQEHVDMGEEKRLLDIISQLEQEIEEKSALMEATEATINEMREQ----MTNLESALLEKSVII 1059
                                       |||:.::....| ||.|||    :..||..:.::    
  Fly   781 ---------------------------EKSSELQNIILT-NERREQARKDLKGLEDTVAKE---- 813

  Fly  1060 NKVEDYQRQIESLEKQNAEMTMVYEELQDRVTRESSMSESLLRVPPDEDTLPGCPTSPSRREQEV 1124
                  .:.:.:|.|      :..::||.|:.:.....||      :||      .....::|::
  Fly   814 ------LQTLHNLRK------LFVQDLQQRIRKNVVNEES------EED------GGSLAQKQKI 854

  Fly  1125 ATLKTS---ITELQSQV----SDLKAELENHLRQIQLKDGNIARLQTDFEEMSERCLSMEVRLAE 1182
            :.|:.:   :|::..|:    :||:.||....::::.....:..|:|..:|..|..:        
  Fly   855 SFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRCTMERVKALETALKEAKEGAM-------- 911

  Fly  1183 LDEDTKQKQELLDR 1196
              .|.|:.|..:||
  Fly   912 --RDRKRYQYEVDR 923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 140/336 (42%)
Motor_domain 8..321 CDD:277568 140/329 (43%)
Smc <680..1449 CDD:224117 118/547 (22%)
TMPIT 779..>867 CDD:285135 21/87 (24%)
Smc 1042..1910 CDD:224117 31/166 (19%)
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 140/331 (42%)
KISc 12..340 CDD:214526 140/336 (42%)
Apolipoprotein 595..744 CDD:279749 46/180 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437991
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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