DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and cos

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_001260765.1 Gene:cos / 35653 FlyBaseID:FBgn0000352 Length:1201 Species:Drosophila melanogaster


Alignment Length:1412 Identity:275/1412 - (19%)
Similarity:507/1412 - (35%) Gaps:445/1412 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 SHAEPYVFDYVFDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGDEQNP--- 100
            :||.|        ..:|.::|:.:....::...::||:.::..|||...||:||:.|:.|:|   
  Fly   139 THALP--------SSSSQEQVYHQTVFPLITLFLEGFDASVVTYGQRGQGKSYTLYGNVQDPTLT 195

  Fly   101 ----GVMVLAAKEIFQQISSETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNVNC 161
                ||:.|..::||..||...||.:.:.||::||....:.|||              |:.|::|
  Fly   196 DSTEGVVQLCVRDIFSHISLHPERTYAINVGFVEICGGDVCDLL--------------GMGNIHC 246

  Fly   162 EECIITSEVD-LLRLLCLGNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQ---SV 222
                  :.|| :...|.:|...|         :|..:|.:|.:.:|.:   ....:.::|   |.
  Fly   247 ------TNVDAVFHWLQVGLSAR---------QSLPAHTLFTLTLEQQ---WVSKEGLLQHRLST 293

  Fly   223 LNLVDLAGSER-ADQTGARGARLKEGGHINKSLLFLSNVIKSLSE----NADNRFTNYRDSKLTR 282
            .:..||.|:|| .||        ..|..::..|..|..||.:|::    ...|....|..:.||.
  Fly   294 ASFSDLCGTERCGDQ--------PPGRPLDAGLCMLEQVISTLTDPGLMYGVNGNIPYGQTTLTT 350

  Fly   283 ILQASLGGNAFTSIICTIKP--SIMEESQSTLSFATRAKKIRIKPQVNEMVSDATMMKRLEREIK 345
            :|:.|.||.|.|.:|..:.|  ..:.|:...|.||.:.:.:|....:|....|.||:.:....: 
  Fly   351 LLKDSFGGRAQTLVILCVSPLEEHLPETLGNLQFAFKVQCVRNFVIMNTYSDDNTMIVQPAEPV- 414

  Fly   346 VLKDKLAEEERKNENQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAET 410
                                                                |.::.|...|::.
  Fly   415 ----------------------------------------------------PESNSSAGPLSQA 427

  Fly   411 GTTEDRIDQFPKVSHLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDF 475
            |..::                |....|..:|..:                 ..:.|.|.::.|| 
  Fly   428 GPGDN----------------FGLQFAASQWSKL-----------------VTNAEGLFSKLID- 458

  Fly   476 GSPRPDVLKPMLTIRQLPDLPLTPKGPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLA 540
                                     ..|.|:..|::|:: .:|      .:.||||.      |:
  Fly   459 -------------------------SKLITEVEKEQIEE-WLF------LKQECEEC------LS 485

  Fly   541 EVTAQRDNLEQESLAEKERYDALEKEVTSLRADNEAANSKISELEEKLSTLKQTMRIMEVENQVA 605
            ...|.|...:...:.|.|.    .::|.|..|::|:.||                   :.||   
  Fly   486 STEAMRQQKQLVPILEAEE----PEDVNSEAANSESPNS-------------------DNEN--- 524

  Fly   606 VGLEFEFEAHKKSSKLRVDDLLSALLEKESTIESLQKSLDNLTR--DVLRNSKEGHMLSIAPEQE 668
               :.:.|:|:.....:::.|:....:|...: .|:|..:.|::  ..:..|::..:.:..||:.
  Fly   525 ---DTDNESHRPDLDDKIESLMEEFRDKTDAL-ILEKHAEYLSKHPKAVMQSQDREIEAQPPEEN 585

  Fly   669 DIAGD----SICNKCEELEKLIADLESKKNSCECDQLR----------LEIVSVRDKLESVESAF 719
               ||    ||.::...::.     .:..::.|...|.          ::..||.|.|||     
  Fly   586 ---GDDRKVSIGSRRRSVQP-----GASLSTAELAMLNRVASQQPPPPIDPESVVDPLES----- 637

  Fly   720 NLASSEIIQKATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHEKHEHVQEKYQK 784
              :|.|.|::|.    |:...:|:  ...|||::...|..:.:.:|   ..|.|..|.:|.|...
  Fly   638 --SSGEGIRQAA----LAAAAATA--PIEQLQKKLRKLVAEIEGKQ---RQLREIEETIQVKQNI 691

  Fly   785 LQEEYEQLESRARSASSAEFQRLQNDNTKFQADIASLNERL----------EEAQNMLTEVQNSE 839
            :.|..:..::|:.:.     ||......|.:|:.....::|          .|.:...|.:.:.|
  Fly   692 IAELVKNSDTRSHAK-----QRFHKKRAKLEAECDKAKKQLGKALVQGRDQSEIERWTTIIGHLE 751

  Fly   840 STVEKLRIQNH---ELTAKIKELETNFEEMQREYDCLSNQLMESVQENDALREEI----KQRPTS 897
            ..:|.|....|   |...|:|:|:.:..|.:::.|.|..:|.:..:....:..|:    :.|.|.
  Fly   752 RRLEDLSSMKHIAGESGQKVKKLQQSVGESRKQADDLQKKLRKECKLRCQMEAELAKLRESRETG 816

  Fly   898 HVEESMRSSGISSDFDEQKQDINLLHQFVQLSESVQQIELQHHSGISRLFRANQMKLDQSEPGLK 962
              :|.:::.|.......|.:.:              |..:.|   ::.:.|.....|:: :||  
  Fly   817 --KELVKAQGSPEQQGRQLKAV--------------QARITH---LNHILREKSDNLEE-QPG-- 859

  Fly   963 LCLESAEYIEEDNRQSDATEPICL--KGFLKRHRFQIKRLSQEHVDMGEEKRLLDIISQLEQEIE 1025
              .|..|.:..:.|....|..:.|  :..|.|...:.|.|:|:     ||::||        |.:
  Fly   860 --PEQQETLRHEIRNLRGTRDLLLEERCHLDRKLKRDKVLTQK-----EERKLL--------ECD 909

  Fly  1026 EKSALMEATEATINEMREQMTNLESALLEKSVIINKVEDYQRQIESLEKQNAEMTMVYEELQDRV 1090
            |   .:||.:|.|....|.:|.                  .|.|::               .||:
  Fly   910 E---AIEAIDAAIEFKNEMITG------------------HRSIDT---------------SDRI 938

  Fly  1091 TRESSMSESLLRVPPDEDTLPGCPTSPSRREQEVATLKTSITELQSQVSDLKAELENHLRQIQLK 1155
            .||......:.|:              :|...|  .::|.:.:..::|.||:    :..|:::|:
  Fly   939 QREKGEQMLMARL--------------NRLSTE--EMRTLLYKYFTKVIDLR----DSSRKLELQ 983

  Fly  1156 DGNIARLQTDFEEMSERCLSMEVRLAELDEDTKQKQELLDRQAQ-KLSDDLCLIDQLQKKNAQLV 1219
            ...:.| :.|..|..||.||..||.|.|:.:  :...||.||.: ||:  |.|....::.:|...
  Fly   984 LVQLER-ERDAWEWKERVLSNAVRQARLEGE--RNAVLLQRQHEMKLT--LMLRHMAEETSASSA 1043

  Fly  1220 EQYHKATESLSLADAKPDQILLSSQYDSQIE----KLNQLLNAAK--------DELHDVRRIKDD 1272
            ....:|.....:  |.|.|......||...:    ....|:.|.|        |      :.||.
  Fly  1044 SYGERALAPACV--APPVQASSDFDYDHFYKGGGNPSKALIKAPKPMPTGSALD------KYKDK 1100

  Fly  1273 EISALRMEFLLQIETNEKENQAKFYAELQETKDRYES--------NVAELKEKLLQVEETLSSVT 1329
            |..:.|..|            |||:     ...||.|        :.||....|::...|.::.|
  Fly  1101 EQRSGRNIF------------AKFH-----VLTRYASAAAAGSSGSTAEESTALIESTTTATATT 1148

  Fly  1330 VRC-------QAELEALKSAHKENI---------SQAVEERNNLIVQ 1360
            ...       :.:.:||.|...|.:         ::...::|.:|:|
  Fly  1149 TSTTTTGAVGKVKDKALVSFRPEQLKRLMPAPTATKVTRQKNKIIIQ 1195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 77/306 (25%)
Motor_domain 8..321 CDD:277568 76/299 (25%)
Smc <680..1449 CDD:224117 147/747 (20%)
TMPIT 779..>867 CDD:285135 20/100 (20%)
Smc 1042..1910 CDD:224117 70/356 (20%)
cosNP_001260765.1 Motor_domain 132..389 CDD:277568 76/297 (26%)
SPEC 657..856 CDD:295325 41/225 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437874
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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