DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and Kif19

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:XP_038942111.1 Gene:Kif19 / 303659 RGDID:1559936 Length:997 Species:Rattus norvegicus


Alignment Length:1074 Identity:268/1074 - (24%)
Similarity:443/1074 - (41%) Gaps:256/1074 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IQVCIKVRP-----CEPGLTSLWQVKERRSIHLADSHAEP-------------YVFDYVFDEGAS 55
            :.|.::|||     .|.|.|.:....:.:.:.|.|...:|             |:||..||..|:
  Rat    12 LMVALRVRPISVSELEEGATLIAHKVDEQMVVLMDPMEDPDDILRAHRSREKSYLFDVAFDFTAT 76

  Fly    56 NQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAKEIFQQISSETER 120
            .:.|:....|.::...:.|:|.|:||||.|..||||||:|.:..||:.|....::|:.| .||..
  Rat    77 QEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTDHEPGIYVRTLNDLFRAI-EETSN 140

  Fly   121 D--FLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNV-NCEECIITSEVDLLRLLCLGNKE 182
            |  :.:.:.|:|||||.|.||||.....|::.|...|::.| ...|....:..::::||..||::
  Rat   141 DMEYEVSMSYLEIYNEMIRDLLNPALGYLELREDSKGVIQVAGITEVSTINAKEIMQLLMKGNRQ 205

  Fly   183 RTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGSERADQTGARGARLKEG 247
            ||...|..|:.||||||:.::.:..|....:....|.|..|.::||||||||.||..||.|:|||
  Rat   206 RTQEPTAANQTSSRSHAVLQVAVRQRNRVKNILQEVRQGRLFMIDLAGSERASQTQNRGQRMKEG 270

  Fly   248 GHINKSLLFLSNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTSIICTIKP--SIMEESQS 310
            .|||:|||.|.|.|.:||:...|::.|||||||||:|:.|||||:.|.:|..|.|  :..|||::
  Rat   271 AHINRSLLALGNCINALSDKGGNKYINYRDSKLTRLLKDSLGGNSRTVMIAHISPASTAFEESRN 335

  Fly   311 TLSFATRAKKIRIKPQVN------EMVSDATMMKRLEREIKVLKDKLAEEERKNENQQK-----V 364
            ||::|.|||.||.:.:.|      .:....:::..|..||:.||.|:.::..:.:.:.|     :
  Rat   336 TLTYAGRAKNIRTRVKQNLLNVSYHIAQYTSIIADLRGEIQRLKCKIDQQAGRGQARGKLDRGDI 400

  Fly   365 EHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPKVSHLPKP 429
            .|::.:::  :|          .||:               |.||.|...:::     :|     
  Rat   401 RHIQAEVQ--LH----------SGQE---------------EQAEMGQLREQL-----IS----- 428

  Fly   430 VFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDFGSPRPDVLKPMLTIRQLPD 494
             .||.                  .:|:......:..:.:..:.        |..:.:|||.....
  Rat   429 -AFHE------------------QMDVRRRLLELENQAMEVQI--------DTSRHLLTIASWEH 466

  Fly   495 LPLTPKGPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLEQESLAE-KE 558
                       :|.::.::..:     |:..|...:|.   .||.::...:.||||...:|. :|
  Rat   467 -----------EKSRRALKWRE-----ERRKESYTKED---SEKDSDTGDEPDNLEPPEVASARE 512

  Fly   559 RYDALEKEVTSLRADNEAANSKISELEEKLSTLKQTM--RIMEVENQVAVGL-----EFEFEAHK 616
            ...||..|...||.:..|...:..||..:...|::|:  ||...|.:..:.|     |.|.|..:
  Rat   513 NIAALVGEQKKLRKEKLALEQRCRELRARGRRLEETLPRRIGSEEQREVLSLLCRVHELEVENTE 577

  Fly   617 KSSKLRVDDLLSALLEKESTIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQEDIAGD---SICNK 678
            ..|...:.|  |||..:...:..|::. .:|..::::.            |..|..|   .|...
  Rat   578 MQSHALLRD--SALRHRREAVRRLEQH-RSLCDEIIQG------------QRQIIDDYNLEIPRH 627

  Fly   679 CEEL-EKLIADLESKKNSCECDQLRLEIVSVRDKLESVESAFNLASSEIIQKA-------TDCE- 734
            .||| |..:.:||...         ||..::.|::.|  .|...:|...|..|       :|.| 
  Rat   628 LEELYEVYLRELEEGS---------LERATIMDRVAS--RALQDSSLPKITPAGTTLTPDSDLES 681

  Fly   735 --RLSKELSTSQN----AFGQLQERY---DALDQQWQAQQAGITTLHEKHEHVQEKYQKLQE--E 788
              .||.|....||    ..|...:.|   .|..:.||.:.:.:.|    ...:|......||  .
  Rat   682 VKTLSSEAQCPQNNTLPPLGTDSDSYHMFKASPRAWQVKSSSVPT----PPPIQVGSLVTQEAPP 742

  Fly   789 YEQLESRARSA-SSAEFQRLQNDNTKFQADIASLNERL---EEAQNMLT-----EVQNSESTVEK 844
            .:.|.|:..|: .|:|                :|:|.|   :|.:.:||     .|:.::.....
  Rat   743 QDSLGSQINSSPDSSE----------------NLSEILLSHKERKEILTRTKCISVKAAQRRSRA 791

  Fly   845 LRIQNHELTAKIKELETNFEEMQREYDCLSNQLMESVQENDALRE----EIKQRPTSHVEESMRS 905
            |..:...|.|...|              .|:..:.|:.|.|.:|.    ..|:.|:..::.::..
  Rat   792 LGTEGRHLLAPATE--------------RSSLSLHSLSEADDVRPPGPLACKRPPSPTLQHAISE 842

  Fly   906 SGISSDFDE-------------------QKQDINLLHQFVQLSESVQQIELQHHSGISRLFRANQ 951
            ..:||...|                   ||:.::        .:..:.:|.:.....||.|....
  Rat   843 DNLSSSTGEGPARAVGPRGDGSGPWVRGQKKCLS--------KKREESLEAKRRKRRSRSFEVTG 899

  Fly   952 MKLDQSEPGLKLCLESAEYIEEDNRQSDATEPIC 985
            ..|.:|:..| |....:|.:      ||...|.|
  Rat   900 QGLSRSKTHL-LGPRPSEGV------SDRRMPAC 926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 133/341 (39%)
Motor_domain 8..321 CDD:277568 131/334 (39%)
Smc <680..1449 CDD:224117 71/358 (20%)
TMPIT 779..>867 CDD:285135 19/98 (19%)
Smc 1042..1910 CDD:224117
Kif19XP_038942111.1 KISc_KIP3_like 11..346 CDD:276821 131/334 (39%)
Smc <326..661 CDD:224117 86/443 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0242
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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