DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmet and klp3

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_594686.1 Gene:klp3 / 2542195 PomBaseID:SPAC1834.07 Length:554 Species:Schizosaccharomyces pombe


Alignment Length:680 Identity:187/680 - (27%)
Similarity:300/680 - (44%) Gaps:171/680 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSIQVCIKVRPCEP------GLTSLWQVKERRSIHLADS-HAEPYVFDYVFDEGASNQEVFDRMA 64
            :||:|..::||...      |...::.:.: .::|:..| ::..:|||.||...::..::|....
pombe     2 TSIKVVCRIRPTNQLEQDLGGNNVIYPLND-STVHIETSDYSGNFVFDRVFHPSSTQNDIFSYSI 65

  Fly    65 KHIVHACMQGFNGTIFAYGQTSSGKTYTMMGDEQN---PGVMVLAAKEIFQQI-SSETERDFLLR 125
            :..|.....|:|||:.|||||.|||||||||.|.|   .|:.....:.||.:| .|.:..::.::
pombe    66 ESTVDDLFLGYNGTVLAYGQTGSGKTYTMMGIENNFEKEGMTPRMLRRIFDKIRDSPSTTEYEVK 130

  Fly   126 VGYIEIYNEKIYDLLNKKNQDLKIHESG-NGIVNVNCEECIITSEVDLLRLLCLGNKERTVGETN 189
            |.|:|||.|||:|||::||..|.:||.. .|:.....:...::||.:.|.:|..|...|.|..|:
pombe   131 VSYMEIYMEKIHDLLSEKNDRLTVHEDKLQGVYVQGLKTIYVSSETEALDILNKGMGSRAVASTS 195

  Fly   190 MNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGSERADQTGARGARLKEGGHINKSL 254
            ||.:|||||:||  ::|..::| ::.....:..|.||||||||...::||.|..|:|...||:||
pombe   196 MNAQSSRSHSIF--VLEVVQTD-TESGETRRGRLFLVDLAGSESVGKSGAVGQTLEEAKKINRSL 257

  Fly   255 LFLSNVIKSLSENADNRFTN--YRDSKLTRILQASLGGNAFTSIICTIKPSIME--ESQSTLSFA 315
            ..|..||.||:   |::.::  ||||||||||:.|||||:.|::|....|....  |:.|||.|.
pombe   258 STLGMVINSLT---DSKLSHVPYRDSKLTRILKESLGGNSRTTLIINCSPDSYNATETLSTLRFG 319

  Fly   316 TRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERKNENQQKVEHLERQIKHDMHKIIC 380
            .|||.|:.|..||..:|    :..::|::.:.||.|:                        :.:|
pombe   320 HRAKSIKNKAVVNSELS----VDEMKRQLYIYKDALS------------------------RCVC 356

  Fly   381 GHSLSDKGQQK--RRRTWCPTASGSH-LELAETGTTEDRIDQFPKVSHLPKPVFFHTSNAGKRWD 442
            |..:::.....  ....|    ||.| |.|                           ||..:: .
pombe   357 GARINNNLDYNNCHSNVW----SGEHSLTL---------------------------SNLAEK-S 389

  Fly   443 NIPKTINILGSLDIGTESNSISEEFLPAECIDFGSPRPDVLKPMLTIRQLPDLPLTPKGPLTTDK 507
            |:.:...|.|:..| .|||:..:|                                    .|...
pombe   390 NLKEAEIIQGNRTI-QESNNDRDE------------------------------------STVAS 417

  Fly   508 IKKEIQDLQMFTSLEKHFEVECEEVQGL----KEKLAE-VTAQRDNLEQESLAEKERYDALEKEV 567
            |.:...|......|....::|.::..|:    |::|:: :||..|        .:|||..|.|  
pombe   418 IHRHNFDSDSINRLYAEAQLELKQRDGVLSSTKQQLSDLMTALGD--------AQERYVELVK-- 472

  Fly   568 TSLRADNEAANSKI---SELEEKLSTLKQTMRIMEVENQVAVGLEFEFEAHKKSSKLRVDDLLSA 629
                  |...||.:   :.|.:|..                      |...:|.....:::..:.
pombe   473 ------NHRVNSNLTANNSLNDKPG----------------------FTIEQKDKNFSINNERNN 509

  Fly   630 LLEKESTIESLQKSLDNLTRDVLRN--SKE 657
            .|:|.||::|...:|.|:.|.:::.  |||
pombe   510 FLQKLSTLDSSLAALVNVQRKLIKALISKE 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 128/335 (38%)
Motor_domain 8..321 CDD:277568 126/328 (38%)
Smc <680..1449 CDD:224117
TMPIT 779..>867 CDD:285135
Smc 1042..1910 CDD:224117
klp3NP_594686.1 KIP1 1..546 CDD:227392 187/680 (28%)
KISc_KHC_KIF5 1..325 CDD:276820 126/329 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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