DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and Golgb1

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_084311.1 Gene:Golgb1 / 224139 MGIID:1099447 Length:3238 Species:Mus musculus


Alignment Length:2633 Identity:515/2633 - (19%)
Similarity:972/2633 - (36%) Gaps:770/2633 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 AKEIFQQISSETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGI-------------VN 158
            |.|...:|...|:.|.|.|:...|....::.|::::|  |:::.:....:             :.
Mouse    38 AMESNNRIMESTQEDALHRLAEAEKLVVELKDIISQK--DVQLQQKDEALQEEKKAAENKIKKIK 100

  Fly   159 VNCEECIITSEVDLLRLLCLGN----KERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVI 219
            ::.:..|::....:..:...|.    .|....|.:.:.:||...   ::.||..|.:..:.:.:|
Mouse   101 LHAKAKIMSLNKHMEEIKTQGGAALPPEAQAEELSKHNKSSTEE---EMEIEKIKHELQEKEKLI 162

  Fly   220 QSVLNLVDLAGSERADQTGARGARLKEGGHINKSLLFLSNVIKSLSENADNRFTNYRDSKLTRIL 284
            .|:...:|  .||:|.|.....|.:::...:.:.|.....:|.:|......          |:..
Mouse   163 SSLQAQLD--QSEQASQLDKSSAEMEDFVLMKQQLQEKEELISTLQTQLSQ----------TQAE 215

  Fly   285 QASLGGNAFTSIICTIKPSIMEESQSTLSFATRAKKIRIKPQVN-------EMVSDATMMKRLER 342
            ||:                    ..|::....|.|..|.:.||.       ::|:.:.:...:::
Mouse   216 QAA--------------------QLSSMQQVVREKDARFETQVRLHEDELLQLVTQSDVETEMQQ 260

  Fly   343 EIKVLKDKLAE-EERKNENQQKVEHLERQ----------IKHDMHKIICGHSLSDKGQQKRRRTW 396
            :::|::.||.| ||......|.|:.|:::          :...:..:...|:......:..|:..
Mouse   261 KLRVMQRKLEEHEEALLGRAQVVDLLQKELTSAEQRNQVLSQQLQLLEAEHNTLKNTMETERQES 325

  Fly   397 CPTASGSHLELAETGTTEDRIDQFPKVSHLPKPVFFHTSNAGKRWDNIPKTINIL-GSL------ 454
            ........||:||                  :.:.||         |:.:.::.| |.|      
Mouse   326 KTLMEKVELEVAE------------------RKLSFH---------NLQEEMHQLQGQLERAGQA 363

  Fly   455 --DIGTESNSI--------------------SEEFLPAECIDFGSPRPDVL--------KPMLTI 489
              |:.|:.:::                    :|:.|.:.|.........:|        :....:
Mouse   364 QADLETQYSALQQRHKTEMEEKTACILSLQKNEQELQSACAALKEENSKLLQEKHDQAAESAQAM 428

  Fly   490 RQLPDLPLTPKGPLTTDKIKKEIQDLQMF--------------TSL-----EKHFEVECEEVQGL 535
            |||            .|:::::.:::..|              |||     |....|..|.|..|
Mouse   429 RQL------------EDQLQQKSKEISQFVNKPNLQKNETASQTSLPDVNNEGDQAVMEETVASL 481

  Fly   536 KEKLAEVTAQRDNL-----EQESL-AEKERYDALEKEVTSLRADNEA--ANSKISELEEKLSTLK 592
            ::::.|:..::..|     |.|.| ||.|:   |...:|.|.|.|.|  |:..:.|:....:||.
Mouse   482 QKRVVELENEKGALLLSSGELEELKAENEK---LSSRITLLEAQNRAGEADGTVCEVSTAGTTLL 543

  Fly   593 QTMRIMEVENQVAVGLEFEF-EAHKKSSKLRVDDLLSALLEKESTIESLQKSLDNL----TRDVL 652
            ........||..|| ||..| :.||:.|.|.|:     :.|.:..|..|:..|...    ..:||
Mouse   544 NRSDSSPEENGQAV-LENTFSQKHKELSVLLVE-----MKEAQEEIAFLKSQLQGKRPEGDYEVL 602

  Fly   653 RNSKEGHMLSIAPEQEDIAGDSICNKCEE-----LEKLIADLESKKNSCECDQLR---LEIVSVR 709
             :.:|..::.........|||.:|...:|     .|:..|.::.:..:.|...|.   :|:.|  
Mouse   603 -DRREVQLMESEGPPSVTAGDVLCAPSDESSGPAAEEEQAGMKDRHRASEAGPLNDAGMELSS-- 664

  Fly   710 DKLESVESAFNLASSEIIQ-KATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHE 773
            .||:.|:.  :||.|.:.| ...:.|||..::...:.:....:|.|.             ..|.|
Mouse   665 PKLDGVDK--SLAVSHVCQCHQGELERLKTQVLELETSLHTAEETYK-------------RNLSE 714

  Fly   774 KHEHVQEKYQKLQEEYEQLESRARSASSAEFQRLQNDNTKFQAD----IASLNERLEEAQNMLTE 834
            |.:.:....| |.||.::....|||..:|..:  :.|...:|..    :|.|..|::|.::.|.|
Mouse   715 KVKEISSLTQ-LSEEVKESAEEARSTLAAVTE--ERDQLLYQVKELDVLAELRARVQELESSLAE 776

  Fly   835 VQNSES-TVEKLRIQN-------HELTAKIKELETNFEEMQREYDCLSNQLMESVQENDALREEI 891
            .:.... ..|..|.|:       |.|:.:.|..:...|.:|||.|.:..|..|...:...|:.::
Mouse   777 AEKQRGLDYESQRAQHNLLTEQIHSLSIEAKSKDVKIEALQRELDGVQLQFCEQGTQMKTLQSQL 841

  Fly   892 KQRPTSHVEESMRSSGISSDFD---------------------EQKQDINLLHQFVQ-------- 927
            :.:.....|.:.|...||.:.:                     |:::|:..|.|.:|        
Mouse   842 EAKEREVREGTERLRDISQEMEGLSQALSQKELEIAKMDQLLLEKQKDVETLQQTIQEKDQQVTE 906

  Fly   928 ----LSESVQQIELQHHS-GI------------SRLFRANQMKLDQSEPGLKLCL---------- 965
                ::|.:.|:..:..| |:            ||...|.:.::::|..|..|.|          
Mouse   907 LSFSMTEKMVQLNEEKFSLGVEIKTLKEQLNLLSRTEEATKEQVEESGAGSSLKLGHDESGQEGL 971

  Fly   966 -ESAEYIEEDNRQS---------DATEPICLKGFLKRHRFQIKRLSQEHVDMGEEKR-------- 1012
             :..|.:.:::.|.         :..|.:.....|:....:::..|::.:..||.:|        
Mouse   972 QQELELLRKESEQRKRKLQAALINRKELLQKVSQLEEELAKVREDSRKEIPFGENERRKLEEDRE 1036

  Fly  1013 -------------------LLDIISQLEQEIE-------EKSALMEATEATINEM---------- 1041
                               |...||:.|.|:|       ||:|..|..:|.:..|          
Mouse  1037 NRDDPEEWGTSKWREVEASLKQTISEKEVELEGIRRDLKEKTAAEEELQAVVQRMTRDLQSKTKQ 1101

  Fly  1042 ----REQMT-------------------------------------------------------- 1046
                :|::|                                                        
Mouse  1102 IDLLQEEVTENQATIQKLVTGTMDAGNGGSAAPVKETAASSPPGAGGEEHWKPELEGRILDLEKD 1166

  Fly  1047 ------NLESALLEKSVIINKVEDYQRQIESLEKQNAEMTMVYEELQDRVTRESSMSESL---LR 1102
                  .|:.||:.:..|:.|.::.::|   |:::..|....|..||.:...::...|::   ||
Mouse  1167 KTQLQKKLQEALIARKAILKKAQEKEKQ---LKEELREQKDAYHHLQGQFHEQNKEKENIADQLR 1228

  Fly  1103 V----------------------PPD--------EDTLPGC--------PTSPSRREQEVATLK- 1128
            .                      ||.        |||.|..        |:.|.    |.|.|: 
Mouse  1229 QLQCQARESIDRQLPGTGQQEPGPPAPSLEGISLEDTEPASESDLHAAQPSPPG----ETAALQA 1289

  Fly  1129 -TSITELQSQVSDLKAELENHLRQIQLKDGNIA-------------------------------- 1160
             .|:.::|:|:.:::.|.|    :::||..:||                                
Mouse  1290 TVSVAQIQAQLKEMEVEKE----ELELKVSSIASELAKKSEEVLLLQDQINEQGLEIQNLKAASV 1350

  Fly  1161 RLQTDFEEMSERCLSMEVRLAELDEDTKQKQELLD----RQAQKLSDDLCLIDQLQKKNAQLVEQ 1221
            ..|...|.:.:...|.::::|.| |..|..|..||    ...||..:...|..||.:|...|...
Mouse  1351 EAQAHTELLKQELESSQLKVAGL-EHLKTLQPELDALHKHMGQKEEEVNYLYGQLSEKEQTLTTV 1414

  Fly  1222 YHKATESLSLADAKPDQILLSSQYDSQIEKLNQLLNAAKDELHDVRRIKDDEISALRMEFLLQIE 1286
            ..:..|...|..|      |.:|.:.|.::..:.|..|:.|:.:::: |..|         |:.|
Mouse  1415 QTEMVEQERLIKA------LHTQLEMQAKEHEERLKQAQVEICELKK-KPTE---------LEEE 1463

  Fly  1287 TNEKEN-QAKFYAELQETKDRYESNVAELKEKLLQVEETLSSVTVRCQAELEALKSAHKENISQA 1350
            ||.|:. |.|..|.|...|:..:.| ..|:|:|....:.:..:| :..|::|:..|...:. ..|
Mouse  1464 TNAKQQLQRKLQAALISRKEALKEN-KSLQEQLSSARDAVERLT-KSLADVESQVSVQNQE-KDA 1525

  Fly  1351 V--------EERNNLIVQHQAEMETIRETLKNKLAEASTQQSKM--------EDAFRAEINEVRA 1399
            |        |||:.||    |||:  |..|:|:....|.:..|:        ::....|:..||:
Mouse  1526 VLGKLTILQEERDKLI----AEMD--RFLLENQSLSGSCESLKLALGGLTEDKEKLMEELESVRS 1584

  Fly  1400 TLMEQLNQTKEDRDKGASKLEEVKKTLEQMINGGRVMSDTIAELEKTKAEQDLAVNKLTKDNIEL 1464
            :.|.:..:.:|...:...:.|.:.::.|.:.|....:...:..:.:.|.|....:.....|..|.
Mouse  1585 SKMAESTEWQEKHKELQKEYEVLLQSYENVSNEAERIQHVVESVRQEKQELYAKLRSTESDKRER 1649

  Fly  1465 EKQCSKTQEQLQMESLTRDQISFEIEAHIKKLELIVASSKKRIIELEEKCDQQVLELDKC----- 1524
            |||....::              |:|...:|:.....|.:::|:||||:.|:...|....     
Mouse  1650 EKQLQDAEQ--------------EMEEMKEKMRKFAKSKQQKILELEEENDRLRAEAQPVGGTGE 1700

  Fly  1525 RLEKL-----SLESEIQKANSEHSCTMEKLQELQAEMKVLSNRNEKEKCDFETK------LETFT 1578
            .:|.|     ||:.|::|...||....::.:.|.||...||......|...|.:      ||. |
Mouse  1701 SMEALLSSNSSLKEELEKITLEHKTLSKEFEALMAEKDALSEETRNLKLQVEAQVLKQASLEA-T 1764

  Fly  1579 FKITDLEEVLKEAQHKVI--------------LYD---------------DLVSQHERLKICLAE 1614
            .|..:.::|::|....|:              |.|               :..|.|:.:|..|.:
Mouse  1765 EKSDEPKDVIEEVTQAVVGKSQERDALSDSAKLEDSEAILMGDGAKPGVSETFSSHDDIKNYLQQ 1829

  Fly  1615 ANELSSNLQKKVMSLH-----TELIDSQKG-----ISSRDVEINELREELKAAMDAKATA----S 1665
            .::|...:.:..|...     ::.::::|.     ||::|.|:..|.||:     .|.|.    .
Mouse  1830 LDQLKGRIAELEMEKQKDRELSQALENEKNALLTQISAKDSELKLLEEEV-----TKRTTLNQQI 1889

  Fly  1666 AEQMTLVTQLK--------DVEERMANQAEKFTREAANLKGSINELLLKLNSMQETKDMLESGNE 1722
            .|::..||:||        |:|||:.||       .|.|.|||.      |..|:..| .:..||
Mouse  1890 QEELCRVTKLKETAEEEKDDLEERLMNQ-------LAELNGSIG------NYYQDVTD-AQIKNE 1940

  Fly  1723 ELKEQLRNSQNLRNMLDEESKMCIS---------LKEKLVKLEDAK---------TSLEQQLRDN 1769
            :|:.::||.|...:.|:||.:..:.         .||.:.|::.|:         ..|::.||:.
Mouse  1941 QLESEMRNLQRCVSELEEEKQQLVKEKTKVESEIRKEYMEKIQGAQKGPANKSHAKELQELLREK 2005

  Fly  1770 KSEIYQR------------------------HTELTKEVELGRNRIGELTKKCEELCSDLENSDQ 1810
            :.|:.|.                        |||..|::::.:..:.:..:..::..::| :|.:
Mouse  2006 QQEVKQLQKDCIRYLERISALEKTVKALEFVHTESQKDLDVTKGNLAQAVEHRKKAQAEL-SSFK 2069

  Fly  1811 IRLDLQETKEQLKKTLENNLGWQQKVDEVTRECEKLRFDMQSKEVQNESKVQELISECEELRSTL 1875
            |.||  :|:.:..:.|.:||              ||:.::||.:...:|::::   :.|:|...|
Mouse  2070 ILLD--DTQSEAARVLADNL--------------KLKKELQSNKESIKSQIKQ---KDEDLLRRL 2115

  Fly  1876 KSKEASFQSEKESMDRTISSLLEDKRNLEEKLCSANDIVAKLETEIAALRPRKSLDRNPVPRKSI 1940
            :..|...:.||::|...:.:|..:|.::||.|......:.:.:.|:..|  :.|||.......:.
Mouse  2116 EQAEEKHRKEKKNMQEKLDALHREKAHVEETLAEIQVSLTRKDQEMKEL--QGSLDSTLAQLAAF 2178

  Fly  1941 TFESEIRKNRRISVHDERRQSYWNDVREFG--IMTDPVD---NNCNCAELNSKLQDCQRELFIRE 2000
            |......::.|..|.||.::  |.  |.||  |.|...:   ...||..|..:|:  |..:.:.|
Mouse  2179 TKSMSSLQDDRDRVIDEAKK--WE--RRFGDAIQTKEEEVRLKEENCIALKDQLR--QMAIHMEE 2237

  Fly  2001 SQVTALKM-------------ELDHH-----PLKDENAQLTKRVIEEQD---KAKVEQKRLKMKL 2044
            .::|..::             ||.||     .|::||.:||.::.:.:.   .:|.|..:|:.:|
Mouse  2238 LKITVSRLEHDKEIWESKAQTELQHHQKAYDKLQEENKELTSQLEDARQLYHDSKNELTKLESEL 2302

  Fly  2045 QDLNARINDLTTA--SAKEPESNQMAQAAKPATVAAQT------QTESDLETILEKT-------N 2094
            :.|..:..||..:  ..||.|:| :....|......|.      |.|:||....|.|       |
Mouse  2303 KSLKDQTTDLNNSLEKCKEHENN-LEGIIKQQEADIQNCKFSCEQLETDLAASRELTSRLHDEIN 2366

  Fly  2095 VKYQEAVRMLRYRYHLIQELKEKLRQNENSDTSNITSL-----------------SAGQTSALKA 2142
            .|.|:.:.:|..:...||...|:|.|..:.:...:.:|                 :..:|:.|..
Mouse  2367 AKEQKIISLLSGKEEAIQLAVEELHQQHSKEIKELENLLSQEEEENVALEEENKRALEKTNQLTE 2431

  Fly  2143 QCESQKKEILAIKYKYEAAKRILAIRNDDLDAL 2175
            ..|:.|||....|.:.::..:.::...||.|.:
Mouse  2432 ALEAIKKESFEQKAQLDSFVKSMSSLQDDRDRI 2464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 39/237 (16%)
Motor_domain 8..321 CDD:277568 37/230 (16%)
Smc <680..1449 CDD:224117 198/1061 (19%)
TMPIT 779..>867 CDD:285135 23/99 (23%)
Smc 1042..1910 CDD:224117 230/1134 (20%)
Golgb1NP_084311.1 SMC_prok_B <56..428 CDD:274008 62/435 (14%)
SMC_prok_B <309..1037 CDD:274008 152/796 (19%)
PRK12704 1167..>1242 CDD:237177 14/77 (18%)
SMC_prok_B 1331..2164 CDD:274008 195/912 (21%)
Smc 1837..2656 CDD:224117 149/676 (22%)
Smc 2269..3057 CDD:224117 44/197 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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