DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and klp-11

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_001369897.1 Gene:klp-11 / 177685 WormBaseID:WBGene00002222 Length:782 Species:Caenorhabditis elegans


Alignment Length:765 Identity:203/765 - (26%)
Similarity:334/765 - (43%) Gaps:237/765 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AKNASSIQVCIKVRPCEPGLTSLWQVKERRSIHLADSHAEPYVFDYVFDEGASNQEVFDRMAKHI 67
            |.|.|.|   :.:|| :.|...|...||:      |..::.:.||.::||.::..::::...:.:
 Worm    29 ANNYSKI---VHMRP-QRGQIELKNPKEQ------DEPSKDFTFDAIYDENSTQSDLYEETFRDL 83

  Fly    68 VHACMQGFNGTIFAYGQTSSGKTYTMMGDEQNP---GVMVLAAKEIFQQISSETERDFLLRVGYI 129
            |.:.:.|:|.||||||||.:|||:||.|...:|   ||:......||:.:::...:::|:|..|:
 Worm    84 VDSVLNGYNATIFAYGQTGTGKTHTMEGKSSDPEQRGVIYKCIDHIFEHMAASHNQEYLVRASYL 148

  Fly   130 EIYNEKIYDLLN-KKNQDLKIHESGNGIVNVNCEECIITSEV-DLLRLLCLGNKERTVGETNMNE 192
            |||.|::.|||. :.|:.|:|.|..:|.|.|......:|..| ::..::..||..|:||.|||||
 Worm   149 EIYQEELRDLLEAESNKKLEIKERPDGGVYVKDLTSKLTRTVGEIHEVMIRGNGHRSVGRTNMNE 213

  Fly   193 RSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGSERADQTGARGARLKEGGHINKSLLFL 257
            .||||||||.|.:|..:.....:..:....|||||||||||..:|||.|.|.||...||.||..|
 Worm   214 HSSRSHAIFIITVECSRIGEDGESHITVGRLNLVDLAGSERQSKTGATGERFKEATKINLSLSAL 278

  Fly   258 SNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTSIICTIKPSI--MEESQSTLSFATRAKK 320
            .|||.:|.: |.:....||||||||:||.|||||:.|.::..|.|:.  .||:..||.:|.|||.
 Worm   279 GNVISALVD-AKSAHIPYRDSKLTRLLQDSLGGNSKTVMVACIGPASYNFEETLGTLRYANRAKN 342

  Fly   321 IRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERKNEN--------------QQKVEHLERQ- 370
            |:.:|::||...|| :::..:.||::|:::|.:.:.::.:              :..:|.:::. 
 Worm   343 IKNQPKINEDPKDA-LLREFQEEIEMLREQLKQRKTRSRDGATQSFYDAERAKLEDDIEAIQKDD 406

  Fly   371 --IKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPKVSHLPKPVFFH 433
              |||:..::|  ..:.:|                | :|.|    ::||:| .:|:.        
 Worm   407 SLIKHEKDRLI--REIQEK----------------H-DLLE----KERIEQ-ARVAE-------- 439

  Fly   434 TSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDFGSPRPDVLKPMLTIRQLPDLPLT 498
                        :..||...|.:|:|.:.                                    
 Worm   440 ------------RIANIQSRLIVGSEEDG------------------------------------ 456

  Fly   499 PKGPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLEQESLAEKERYDAL 563
                                 .||..          .||:.|::..:|..|.::...|:|..:||
 Worm   457 ---------------------RLESR----------TKEQHAQLEKKRRELAEQKRREREMVEAL 490

  Fly   564 EKEVTSLRADNEAANSKISELEEKLSTLKQTMRIMEVENQVAVGLEFEFEAHKKSSKLRVDDLLS 628
            |::                  ||....||||.                       |.||.     
 Worm   491 ERQ------------------EEDTVDLKQTF-----------------------SDLRT----- 509

  Fly   629 ALLEKESTIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQEDIAGDSICNKCEELEKLIADLESKK 693
               |.|:..:.|:|.|..|.:  .||           |..|::| :..::.::|::.||::..  
 Worm   510 ---EVEAKTKKLKKMLIKLRQ--ARN-----------EIRDVSG-AYSDERQDLDQTIAEVSK-- 555

  Fly   694 NSCECDQLRLEIVSV-----RDKLESVE--------------SAFNLASS 724
                  :|:|:::.|     ||..|.::              :||...||
 Worm   556 ------ELKLKLLIVENFIPRDVSERIKERAEWNEDSFEWNVNAFQSTSS 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 129/326 (40%)
Motor_domain 8..321 CDD:277568 127/319 (40%)
Smc <680..1449 CDD:224117 13/64 (20%)
TMPIT 779..>867 CDD:285135
Smc 1042..1910 CDD:224117
klp-11NP_001369897.1 Motor_domain 12..343 CDD:419868 130/324 (40%)
SMC_prok_B 337..>584 CDD:274008 73/429 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.