DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and klp-18

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_501093.1 Gene:klp-18 / 177474 WormBaseID:WBGene00002228 Length:932 Species:Caenorhabditis elegans


Alignment Length:1191 Identity:280/1191 - (23%)
Similarity:487/1191 - (40%) Gaps:361/1191 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DSHAEPYVFDYVFDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMG------D 96
            |:.::.|...::||..:|.::||..:||.||..|::|:|||:||||||.||||:||:|      |
 Worm    36 DNGSKRYELHHIFDSSSSQEDVFGTVAKKIVEDCVEGYNGTVFAYGQTGSGKTHTMLGPCDSWTD 100

  Fly    97 EQNPGVMVLAAKEIFQQISSETER----DFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIV 157
            ::..|::..:.:.:||.:.::.:.    .|.:.|.::|:|||.||||||.||: :::.:||..|.
 Worm   101 QELMGLIPRSVEHVFQHLDTKAKECQKLTFSVSVEFVELYNEVIYDLLNAKNK-VQLRDSGKDIQ 164

  Fly   158 NVNCEECIITSEVDLLRLLCLGNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQ-- 220
            .|......:.:.:||:.|:..|.:||:.|.|.||..||||||:..|.|   |:.....:.|.:  
 Worm   165 LVGALSKNVDNPLDLMHLVQKGWQERSTGSTAMNAESSRSHALLIIRI---KTQERTGELVKERS 226

  Fly   221 SVLNLVDLAGSERADQTGARGARLKEGGHINKSLLFLSNVIKSLSENADNR-FTNYRDSKLTRIL 284
            |:|||||||||||...|.:.|.||||..:||.||..|...|:.|::.:..: ...||||.||.||
 Worm   227 SILNLVDLAGSERQTHTKSSGDRLKEATNINSSLTVLGRCIRLLADPSKAKGHVPYRDSHLTHIL 291

  Fly   285 QASLGGNAFTSIICTIKP--SIMEESQSTLSFATRAKKIRIKPQVNEMVSDATMMKRLEREIKVL 347
            :.|||||:.|::|..:.|  ...:||.|||.||                ...||:..:     ..
 Worm   292 KNSLGGNSKTAVIVNMHPDRDFAQESNSTLMFA----------------QSCTMIMNI-----AT 335

  Fly   348 KDKLAEEERKNENQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGT 412
            ::::...::::..::.::.|.:::              |:.::|.|     |...|.|:.||   
 Worm   336 RNEVMTGDQESSYKKAIQELRQEV--------------DETREKVR-----TEFASQLDEAE--- 378

  Fly   413 TEDRIDQFPKVSHLPKPVFFHTSNAGKRWDNI---PKTINILGSLDIGTESNSISEEFLPAECID 474
                ::|          :...|.|...|.:|:   .|....|....||:|:..|..||       
 Worm   379 ----VEQ----------LRLKTENNSLRLENVDLRAKYDFALLKYTIGSENEQIVNEF------- 422

  Fly   475 FGSPRPDVLKPMLTIRQLPDLPLTPKGPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKL 539
                                              ||.|.:   |::.......||          
 Worm   423 ----------------------------------KKIISE---FSAANSSSPFEC---------- 440

  Fly   540 AEVTAQRDNLEQESLAEKERYDALEKEVTSLRADNEAANSKISELEEKL--STLKQTMRIMEVEN 602
              :..:...|:.|..|.::||..|:||.::||          :..:|.|  :.|.||....|   
 Worm   441 --IALKNQTLQLEIEASEKRYQELQKETSALR----------NRYQENLDATILMQTPSAKE--- 490

  Fly   603 QVAVGLEFEFEAHKKSSKLRVDDLLSALLEKESTIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQ 667
                        .:.||:.:                         .|:.........|...|   
 Worm   491 ------------RRSSSRPK-------------------------RRETQYRPSPARMALFA--- 515

  Fly   668 EDIAGDSICNKCEELEKLIADLESKKNSCECDQLRLEIVSVRDKLE-----SVESAFNLASSEII 727
                      :.|..|..:.||:     |:.::|..|:.|::||.|     |:|:. .|...||:
 Worm   516 ----------EVETSEDAVLDLQ-----CQNEKLSCELSSLKDKHEEATSKSIETE-RLLQGEIV 564

  Fly   728 QKATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHEKHEHVQEKYQKLQE-EYEQ 791
            ....:...:|:.|..|:......:|:..|.:          .||.:...|:....:::.| |...
 Worm   565 ALQKEVSIVSESLRKSEAVAEGYKEKVTANN----------LTLDKLLLHIDASRKRIAELELSS 619

  Fly   792 LESRARSASSAEFQRL------QNDNTKFQADIASLNERLEE---AQNML----TEVQNSESTVE 843
            .||..||:...|.|||      ::...|...:.|:|.|.|.:   :.|:|    .|:|.|.:|::
 Worm   620 KESENRSSEELEEQRLYYVSMIEDLERKASDEYAALREELNQKTLSSNLLQVQVDELQLSNATIK 684

  Fly   844 KLRIQNHELTAK---IKELETNFEEMQREYDCLSNQLMESVQENDALREEIKQRPTSHVEESMRS 905
            ||   |.:|:.|   |:.||.:.|:        .:|::..::|...|...               
 Worm   685 KL---NADLSTKAGLIRSLEDSIEK--------KSQMITRLEEQAVLDSS--------------- 723

  Fly   906 SGISSDFDEQKQDINLLHQFVQLSESVQQIELQHHSGISRLFRANQMKLDQSEPGLKLCLESAEY 970
                                 :||.:.:|:|   ||.                      ||:.::
 Worm   724 ---------------------ELSSTKRQLE---HSR----------------------LEAIQW 742

  Fly   971 --IEEDNRQSDATEPICLKGFLKRHRFQIKRLSQEHVDMGEEKRLLDIISQLEQEIEEKSALMEA 1033
              |.|:...:..|:       ||.|        |:.:|....|:.|:|.| ::..::..:|.::.
 Worm   743 RKISEETTSAMQTQ-------LKDH--------QKDIDQCRHKKKLEIQS-MQLSLDNANARVKE 791

  Fly  1034 TEATINEMRE--------QMTNLESALLEK-SVIINKVED---------YQRQIESLEKQNAEMT 1080
            :||.:.:::.        :|:.:|:...|| ||.:.|.||         .|.::|.:|.:|..::
 Worm   792 SEAMMKKLQNDEKQKFDMKMSEIENTFKEKLSVSLKKQEDTIRRQSLAENQGKLEVMENKNRVLS 856

  Fly  1081 MVYEELQDRVTRESSMSESLLRVPPDEDTLPGCPTSPSRREQEVATLKTSITELQSQVSDLKAEL 1145
            ...|.||.:.::::.:..:.||...|             |...|..|:.....|:..:|.|::|.
 Worm   857 ETIESLQSQHSQDTEVINAGLRTRGD-------------RVGYVDKLRVEKKALEETISQLRSEN 908

  Fly  1146 ENHLRQIQLKDGN--IARLQT 1164
            :...:.::.:..|  :.|.||
 Worm   909 DKLKKIMRGESANKPVLRSQT 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 119/304 (39%)
Motor_domain 8..321 CDD:277568 119/297 (40%)
Smc <680..1449 CDD:224117 110/529 (21%)
TMPIT 779..>867 CDD:285135 30/104 (29%)
Smc 1042..1910 CDD:224117 30/143 (21%)
klp-18NP_501093.1 KISc 5..328 CDD:276812 119/311 (38%)
SbcC 342..913 CDD:223496 155/842 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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