DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and klp-19

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_499742.1 Gene:klp-19 / 176750 WormBaseID:WBGene00002229 Length:1083 Species:Caenorhabditis elegans


Alignment Length:1354 Identity:306/1354 - (22%)
Similarity:524/1354 - (38%) Gaps:401/1354 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSIQVCIKVRP-----CEPGLTSLWQVKERRSIHLADSHAEPYVFDYVFDEGASNQEVFDRMAKH 66
            :|::|.::.||     .:.|.:...|..|... .:..:.:..:.||.||.:.:..:.|::..|..
 Worm     5 ASLRVVVRARPMNGRETKEGASRCVQFYENTK-QIVINESATFTFDAVFADTSDQESVYETTALP 68

  Fly    67 IVHACMQGFNGTIFAYGQTSSGKTYTM-----MG-DEQNPGVMVLAAKEIFQQI-SSETERDFLL 124
            ::.....|||.|:.|||||.|||||||     :| ||...|::......:||:| ::|....|.:
 Worm    69 LLDRIFAGFNATVLAYGQTGSGKTYTMGTEDNVGTDEMRRGIIPRLVSALFQRIMNTEAPESFAV 133

  Fly   125 RVGYIEIYNEKIYDLLNKKNQDLKIH--ESGNGIVNVNCEECIITSEVDL---LRLLCLGNKERT 184
            .|...|:|.:.:||||......|.:|  |....:||:..     ...:||   |:.|.:|...||
 Worm   134 TVSMFEVYGDNVYDLLRPDKVKLNVHGDEKNCTVVNLTA-----VPVIDLKGALKQLAVGCHYRT 193

  Fly   185 VGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGSERADQTGARGARLKEGGH 249
            ..||.||..||||||:|.:.:|  |:..::.|:...:.|.|||||||||..:|.|.|.|:|||.:
 Worm   194 KAETAMNAMSSRSHAVFTVFVE--KTATAECDSAFSAKLQLVDLAGSERLKKTEAEGNRMKEGIN 256

  Fly   250 INKSLLFLSNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTSIICTIKP--SIMEESQSTL 312
            ||..||.||.||.:|:  ...:...||:|.:||:||.|||||:||..:..|.|  |..:|:.:||
 Worm   257 INGGLLILSQVIAALA--TKQKHIPYRNSVITRVLQDSLGGNSFTVFLACISPADSNSQETLNTL 319

  Fly   313 SFATRAKKIRIKPQVN------EMVSDATMMKRLEREIKVLKDKLAEEE-RKNENQQKVEHLERQ 370
            .:|.|||:|:.||.||      |:......:|||::|...||..:|..| |.|:.....|.|   
 Worm   320 RYADRAKQIKNKPIVNKNPKAEEIAILQAQLKRLQKENADLKQGIAPAEVRFNDANNSAEIL--- 381

  Fly   371 IKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPKVSHLPKPVFFHTS 435
                        ||.::..:|                     ||...::..|.|           
 Worm   382 ------------SLKEEVVRK---------------------TEQLKERAMKQS----------- 402

  Fly   436 NAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDFGSPRPDVLKPMLTIRQLPDLPLTPK 500
                                               |||                           
 Worm   403 -----------------------------------ECI--------------------------- 405

  Fly   501 GPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLEQESLAEKERYDALE- 564
                          ::|....:|:..:| |:...|:..|.:|        :.::..:|..||.| 
 Worm   406 --------------IRMSALTQKNSRLE-EDKAKLQSMLTDV--------RNTVLNEEMLDAAEV 447

  Fly   565 -KEVTSLRADNEAANSKISELEEKLS------TLKQTMRIMEVENQVAVGLEFEFEAHKKSSKLR 622
             :.:..:..|.|.:.:...:..::.:      |:..|.|:.|        |:.|.:..:|...::
 Worm   448 VRSIQQVVGDTEESTTLADDDNDETALGGQDDTIYDTERLPE--------LQAELDDLEKQIAMK 504

  Fly   623 VDDLLSALLEKESTIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQEDIAGDSICNKCEELEKLIA 687
            .::...||.|:.:.||::|:.....|:.|:|                                |:
 Worm   505 DENRQKALDEQRAFIEAMQQRESEKTQLVVR--------------------------------IS 537

  Fly   688 DLESKKNSCECDQLRLEIVSVRDKLESVESAFNLASSEIIQKATDCERLSKELSTSQNAFGQLQE 752
            :||::.|            .:|.:.:.|.:|..|| .|..||..|.||...|.....|...:|| 
 Worm   538 ELETEMN------------KLRQEGKKVTTAAKLA-EERRQKLKDLERQHAEDKKVLNDMKKLQ- 588

  Fly   753 RYDALDQQWQAQQAGITTLHEKHEHVQEKYQKLQEEYEQLES------RARSASSAEFQRLQNDN 811
                                |....::|..:|.::|.:.|::      |.:.|.:::||..:.  
 Worm   589 --------------------ETRRRMEETLKKTEDELKNLKTQRLRLLREQRAEASKFQAFKQ-- 631

  Fly   812 TKFQADIASLNERLEEAQN------------------MLTEVQNSESTVEKLRIQNHELTAKIKE 858
             |.:.::|.:..:|::.:|                  .|||...:..|:.:|.::.    |..|.
 Worm   632 -KHEREMAQMKSKLQKRENDVAIQKRMTDQKLTVLQMRLTEANRANKTLRELNLKR----ANRKS 691

  Fly   859 LETNFEEMQREYDCLSNQLMESVQENDALREEIKQRPTSHVEESMRSSGISSDFDEQKQDINLLH 923
            ..||...:|                 :.:.||::     |...:.||..:..|...|:.|     
 Worm   692 SPTNASALQ-----------------NMIEEELE-----HEMCAQRSHWLCEDLRRQRHD----- 729

  Fly   924 QFVQLSESVQQIE-LQHHSGISRLFRANQMKLDQSEPGLKLCLESAEYIEEDNRQSDATEPICLK 987
                |.:::..:| ::...|..|...|:      ::|.:.:.:|..|..|. .||.:.|   .|:
 Worm   730 ----LMQNINTVESMKFEGGKRRRISAS------ADPNVSVVIEGEEEFEV-KRQKELT---FLR 780

  Fly   988 GFLKRHRFQIKRLSQEHVDMGEEKRLLDIISQLEQEIEEKSALMEATEA-TINEMREQMTNLESA 1051
            ..|:....:||...:.....|.|:|   ..|:.|:...|.....||..| .:..:|::: .||..
 Worm   781 ASLETLNEEIKDSLRNETIAGNEER---ANSRWEKVPAEMRPAFEAVYAQAVAHIRKEI-ELEFK 841

  Fly  1052 LLE-KSVIINKVEDYQRQIESLEKQNAEMTMVYEEL-QDRVTRESSMSESLL---------RVPP 1105
            |.. ||....|:.......|..:|::.||...|.|| |.....:|.:.|.:.         ||  
 Worm   842 LARTKSEFTAKIASKASHEEKRKKEDEEMRAKYRELAQCLEDAKSGLHEKIAFLLCLIKENRV-- 904

  Fly  1106 DEDTLPGCPTSPSRREQEVATLKTSITELQSQVSDLKAELENHLRQIQLKDGNIARLQTDFEEMS 1170
            ||:.:           |:..:||....:::.:|.  ||.               .|..|:|    
 Worm   905 DENAI-----------QQFESLKNQFCDVEQKVK--KAS---------------RRKTTNF---- 937

  Fly  1171 ERCLSMEVRLAELDEDTKQKQELLDRQAQKL------SDDLCLID---QLQKKNAQLVEQYHKAT 1226
                     :..|....:.::....|:|.|.      |:|:.:.|   |.:|.::.|..:.::.|
 Worm   938 ---------MGGLTPKPELQRNERARRAVKYYGNVVNSEDVTMDDSRHQKRKDHSLLAVEMNRTT 993

  Fly  1227 ES-----LSLADAKPDQILLSSQYDSQIEKLNQLLNAA---KDELHDVRRIKDD 1272
            :.     ::::..|.|.....::.|..||  |:.:|.|   ||..:....:.||
 Worm   994 DDNVKRRVAMSPIKCDDDTRLTEEDEDIE--NEAMNNATFVKDSFNSATIVLDD 1045

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 124/338 (37%)
Motor_domain 8..321 CDD:277568 121/331 (37%)
Smc <680..1449 CDD:224117 128/647 (20%)
TMPIT 779..>867 CDD:285135 21/111 (19%)
Smc 1042..1910 CDD:224117 53/259 (20%)
klp-19NP_499742.1 KISc 6..326 CDD:276812 119/329 (36%)
SMC_prok_A <342..621 CDD:274009 77/484 (16%)
Smc <481..825 CDD:224117 89/468 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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