DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and golg-4

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_001355507.1 Gene:golg-4 / 175445 WormBaseID:WBGene00010306 Length:1642 Species:Caenorhabditis elegans


Alignment Length:1911 Identity:424/1911 - (22%)
Similarity:754/1911 - (39%) Gaps:457/1911 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 MNERSSRSHAIFKII-----------IESRKSDHSDDDAVIQSVLNLVDLAG----SERADQTGA 239
            |||:.:.|.|...|.           .|:..:...:..:.|.|.:...||.|    |..:.....
 Worm    38 MNEQPAGSDASASISKRFTGESGETKAENPANTSIESSSAIMSEIPEADLLGLGLSSTESPSNRR 102

  Fly   240 RGARLKEGGHINKSLL-----FLSNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTSIICT 299
            |.:..::..|.|:|.|     .:.|.|.|..|...:      ||:       |:..:|| |:..|
 Worm   103 RRSPSEDSIHSNESTLAALLQSIPNAISSALETIPS------DSE-------SVASDAF-SVRST 153

  Fly   300 IKPSIMEESQSTLSFATRAKKIR--------IKPQVN------EMVSDATMMK--RLEREIKVLK 348
            ..|:.....:..|  ||...|.|        :...||      |...|..:.|  :|..|.::|.
 Worm   154 NDPAYNSRLKQRL--ATYKAKYRDAVHRHNKLVDDVNTTRKLLETTQDECLQKVEKLRLEKRILA 216

  Fly   349 DKLAEE----ERKNENQQKVEHLERQIKHDMHKIICGHSL-SDKGQQKRRRTWCPTASGSHLELA 408
            :||:..    :.|.|.::|.|..:|.::....||   .|| .||.:|::               .
 Worm   217 EKLSNSAGNGDGKEELEKKCEDYKRMLEQCKIKI---KSLQQDKKEQQQ---------------L 263

  Fly   409 ETGTTEDRIDQFPKVSHLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTE--------SNSISE 465
            .|...:|.:|  |::..:.:.:    ....:.|.|.....:...::::.|.        .|..||
 Worm   264 ITVDNDDSVD--PRIREMEQRI----QKTEEEWTNRINESDQQHAINLATTKAEMHAALENKDSE 322

  Fly   466 -EFLPAECIDFGSPRPDVLKPMLTIRQLPDLPLTPKGPLTTDKIKKEIQDLQMFTSLEKHFEVEC 529
             |....:|........|.                  ....:||::| :|      ::.|..|.|.
 Worm   323 IEQWRRKCATLEQQDADA------------------NQRWSDKVEK-VQ------AMNKALESEK 362

  Fly   530 EEVQGLKEKLAEVTAQ--RDNLEQESLAEKERYDALEKEVTSLRADNEAANSKIS----ELEEKL 588
            .|   :.|||:|..||  :..||:|.....|....|..|:..|:.:.|....::|    :||.|.
 Worm   363 NE---MIEKLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERLKEETEKMRLEMSTYKVQLEAKE 424

  Fly   589 STLKQTMRIMEVENQVAVGLEFEFEAHKKSSKLRVDDLLSALLEKESTIESLQKSLDNLTRDVLR 653
            |      |..:.|.:....|:.|..|.|.:.    |||.|.:.|..|:.|:            .|
 Worm   425 S------REFDEEREDVEALKLELNAVKSTR----DDLESRITENSSSFEN------------YR 467

  Fly   654 NSKEGHMLSIAPEQEDIAGDSICNKCEE-------LEKLIADLESKKNSCECDQL---RLEIVSV 708
            :..|..:.:...:.|.:..:  |:|..|       ..:.||.:|.:....:..::   ..|..::
 Worm   468 SEAEKTLAAAKAQFEKMVSE--CDKWREKYEERAAASEHIATVEFETQETDAHRILEFEAEKKAL 530

  Fly   709 RDKLESVESAFNLASSEIIQKATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHE 773
            .:|.|.:...|..|..|..:......||.:|          :.|:.|||..:....:|....:..
 Worm   531 AEKCEELTLKFEQADKEKNEMVQQLSRLQQE----------MLEKCDALQAEVNEAKALREEIQA 585

  Fly   774 KHEHVQEKYQKLQEEYEQLESRARSASSAEFQRLQNDNTKFQAD-IASLNERLEEAQNMLTEV-- 835
            |::.|.:|.:::|.|.|:    ::....:|.|..:|:..:.:.: :|...|:|...||:|.||  
 Worm   586 KYDDVTQKAERIQGELEE----SKKVLESEKQAFENEKEQEREEQLAKAMEKLNSEQNILDEVTK 646

  Fly   836 --QNSESTVEKLRIQNHELTAKIKELETNFEEMQREYDCLSNQLMESVQENDALREEIKQRPTSH 898
              :.||..|...|....|||.|::|.|......:.|.:.:|.:|..|         |...:..|.
 Worm   647 KLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSS---------ETSLKEFSD 702

  Fly   899 VEESMRSSGISSDFDEQKQD-INLLHQ-FVQLSESVQQIELQHHSGISRLFRANQMKLDQSEPGL 961
            :.|:|:...|:.  ::||.: :.||.| ..::.:::..:|:|           .|:.|:.:...:
 Worm   703 MIEAMKIQLINC--EKQKDEAVELLKQKLEEVEKNMSDVEVQ-----------KQLLLESTTSEM 754

  Fly   962 KLCLESAEYIEE---------DNRQSDATEPICLKGFLKRHRFQIKRLSQEHVDMGEEKRLLDII 1017
            |...|:||.:::         :|.:.||.....||..|:         |.|.          ..|
 Worm   755 KQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALE---------SDES----------SAI 800

  Fly  1018 SQLEQEIEEKSALMEATEATINEMREQMTNLESALLEKSVIINKVEDY-QRQIESLEKQ-NAEMT 1080
            |::.:::|.....:||:|...:|:||||..|:           ||.:. |..|:.|:|. ..||.
 Worm   801 SEITKQMEAAKKELEASEKEKSELREQMDRLQ-----------KVHNAGQEDIQKLQKTWELEMA 854

  Fly  1081 MVYEELQD-RVTRE------SSMSESLLRVPPDEDT-LPGCPTSPSRREQEVATLKTSITELQ-- 1135
            .:.:..:| ::.||      .:..|.|..|..::.| :.....:....|:||..||..:...|  
 Worm   855 KIAKSTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVKVLKEQLERAQSA 919

  Fly  1136 ---------SQVSDLKAELENHLRQIQLKDGNIARLQTDFEEMSERCLSMEVRLAELDEDT---K 1188
                     ||.:|...|||..|:..|      .|...:.|..:|...|:...|...:.:|   |
 Worm   920 LESSQELASSQKADKIQELEKELQNAQ------KRSSEELETANEMVRSLTATLENSNSETEILK 978

  Fly  1189 QKQELLDRQAQKLSDDLCLIDQLQKKNAQLVEQYHKATESLSLADAKPDQILLSSQYDSQIEKLN 1253
            ||.|.||::.|          ..|:....|.|:.:..|.||:..:          |..:||:.|.
 Worm   979 QKLETLDKELQ----------ARQQTEKALTEEINVLTTSLAEKE----------QQTAQIQNLQ 1023

  Fly  1254 QLLNAAKDELHDVRRIKDDEISALRMEFLLQIETNEKENQAKFYAELQETKDRYESNVAELKEKL 1318
            ..:                        :.:::|..||....|  .:||:......|         
 Worm  1024 TQI------------------------YQMEVEKEEKVELVK--VQLQQAAQSSSS--------- 1053

  Fly  1319 LQVEETLSSVTVRCQAELEALKSAHKENISQAVEERNNLIVQ-HQ--AEMETIRETLKNKLAEAS 1380
              .||.|.:...:.:|:|:|::.|..|.::..:.|:.:|..| ||  .|.|...|.:|.:|.:|:
 Worm  1054 --AEEALRAEIEQLEAKLKAVEQAKAEALNSLLAEKEHLQAQLHQLGVEKEEKLEMVKVQLQQAA 1116

  Fly  1381 TQQSKMEDAFRAEINEVRATLMEQLNQTKEDRDKGASKLEEVKKTLEQMINGGRVMSDTIAELEK 1445
            ...|.:|.|.||||.::.|.|.|               :||.||         ..::.::||.|:
 Worm  1117 QSSSSVEQALRAEIEKLEAKLQE---------------IEEEKK---------NALNASLAEKEQ 1157

  Fly  1446 TKAE-QDLAVNKLTKDNIELEKQCSKTQEQLQMESLTRDQISFEIEAHIKKLELIVASSKKRIIE 1509
            ..|: |:|.. :|.:..:|.|::....:.|||..:.:...:...:.|.|:|||..:...:|..::
 Worm  1158 QTAQIQELQA-QLHQLEVEKEEKLEMVKVQLQQAAQSSSSVEQALRAEIEKLEAKLQEIEKAKMQ 1221

  Fly  1510 LEEKCDQQVLEL----DKCRLEKLSLESEIQKANSEHSCTMEKLQELQAEMKVLSNRNEKEKCDF 1570
            ...|.:|:|.||    :|.|:|.::.|..|....||       |..:..|:.|.....||.|.||
 Worm  1222 NSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRSE-------LSTISTELVVQKATVEKTKMDF 1279

  Fly  1571 ETKLETFTFKIT-DLE-EVLKEAQHKVILYDDLVSQHERLKICLAEANELSSNLQKKVMSLHTEL 1633
             .:|||...:.| |.| |.::|.:.:.....:|.:....|::.....|||.::.:||:..|    
 Worm  1280 -GELETREKRATADRENEKMEEIRLRETFAKELETMGSALEVKETAYNELKASAEKKIAKL---- 1339

  Fly  1634 IDSQKGISSRDVEINELREELKAAMDAKATASAEQMTLVTQLKDVEERMANQAEKFTREAANLKG 1698
                         .::..|:||.|.:::..||..:...:       |..|.||:..:.:      
 Worm  1340 -------------TSQFEEKLKKAQNSQDEASESRFKTL-------EASAEQAKLESEQ------ 1378

  Fly  1699 SINELLLKLNSMQETKDMLESGNEELKEQLRNSQNLRNMLDEESKMCISLKEKLVKLEDAKTSLE 1763
                   ||.:::|.....||..||||.:..:::..|:..:.|.:|   |:.:..:|.|....||
 Worm  1379 -------KLRALEELLKSSESEIEELKIKEISAEKDRSHWEVEKEM---LEGEAKELTDRIEGLE 1433

  Fly  1764 QQLRD----NKSEIYQRHTELTKEVELGRNRIGELTKKCEELCSDLENSDQIRLDL-QETKEQL- 1822
            .:::.    |:::..:..|:..|.|.       ||.|:.::|.::|.:.:| :.|: ||...:| 
 Worm  1434 AEVKKLTAANETKAVKADTDARKVVR-------ELQKEVKQLYNELNDKNQ-QFDMVQEELTRLK 1490

  Fly  1823 --KKTLEN-NLGWQQKVDEVTRECEKLRFDMQSKEVQNESKVQELISECEELRSTLKSKEASFQS 1884
              |:|.|| .|..|:::||..|..|   |..:.:....:.|:...::|.::||..:...|.:.:|
 Worm  1491 TSKETAENGQLQVQKQMDEEDRRSE---FSFKEEIASLKQKLDASLTEADDLRMQVSRNEKTPRS 1552

  Fly  1885 E-KESMDRTISSLLEDKRNLEEKLCSANDIVAKLETE-IAALRPRKSLDRNPVPRKSIT------ 1941
            . ..|..||             |....:.|....|.| :..:..|...:|..:.::|:|      
 Worm  1553 NGNASTGRT-------------KSMELHGIADPAEAEYLRNVLYRYMTNRESLGKESVTLARVIG 1604

  Fly  1942 ----FESEIRKNRRISVHDERRQSYW 1963
                |:....||  :...:|.||:.|
 Worm  1605 TVARFDESQMKN--VISSEESRQASW 1628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 35/165 (21%)
Motor_domain 8..321 CDD:277568 33/150 (22%)
Smc <680..1449 CDD:224117 182/821 (22%)
TMPIT 779..>867 CDD:285135 25/92 (27%)
Smc 1042..1910 CDD:224117 213/911 (23%)
golg-4NP_001355507.1 DUF3584 207..>884 CDD:378817 175/818 (21%)
SMC_prok_B 577..1442 CDD:274008 243/1056 (23%)
SH3_and_anchor <1444..1549 CDD:275056 29/115 (25%)
Grip 1572..1620 CDD:197860 9/49 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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