DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmet and Kif5b

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_032474.2 Gene:Kif5b / 16573 MGIID:1098268 Length:963 Species:Mus musculus


Alignment Length:1028 Identity:270/1028 - (26%)
Similarity:449/1028 - (43%) Gaps:217/1028 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AEPYVFDYVFDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMG---DEQNPGV 102
            ::||.||.||....|.::|::..||.||...::|:|||||||||||||||:||.|   |.:..|:
Mouse    43 SKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGI 107

  Fly   103 MVLAAKEIFQQISSETER-DFLLRVGYIEIYNEKIYDLLNKKNQDLKIHESGNGIVNV-NCEECI 165
            :....::||..|.|..|. :|.::|.|.|||.:||.|||:....:|.:||..|.:..| .|.|..
Mouse   108 IPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERF 172

  Fly   166 ITSEVDLLRLLCLGNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAG 230
            :.|..:::..:..|...|.|..|||||.|||||:||.|.:   |.:::..:..:...|.||||||
Mouse   173 VCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINV---KQENTQTEQKLSGKLYLVDLAG 234

  Fly   231 SERADQTGARGARLKEGGHINKSLLFLSNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTS 295
            ||:..:|||.||.|.|..:|||||..|.|||.:|:|.  :.:..|||||:|||||.|||||..|:
Mouse   235 SEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEG--STYVPYRDSKMTRILQDSLGGNCRTT 297

  Fly   296 IICTIKPSIMEESQ--STLSFATRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERKN 358
            |:....||...||:  |||.|..|||.|:           .|:...:|...:..|.|..:|:.||
Mouse   298 IVICCSPSSYNESETKSTLLFGQRAKTIK-----------NTVCVNVELTAEQWKKKYEKEKEKN 351

  Fly   359 EN-QQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPK 422
            :. :..::.||.::..                      |            ..|.|....:||.|
Mouse   352 KTLRNTIQWLENELNR----------------------W------------RNGETVPIDEQFDK 382

  Fly   423 VSHLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDFGSPRPDVLKPML 487
            ..                           .:|:..|....|:                       
Mouse   383 EK---------------------------ANLEAFTADKDIA----------------------- 397

  Fly   488 TIRQLPDLPLTPKGPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLEQE 552
                           :|:||....:.....||..|:.   :||      |:||::..|.|:.::|
Mouse   398 ---------------ITSDKPAAAVGMAGSFTDAERR---KCE------EELAKLYKQLDDKDEE 438

  Fly   553 -----SLAEKERYDALEKE--VTSLRADNEAANSKISELEEKLSTLKQTMR-IMEVENQVAVGLE 609
                 .|.||.:...|::|  :.|.|.|.:...::::.|:.:....|:.:: :::...::||  .
Mouse   439 INQQSQLVEKLKTQMLDQEELLASTRRDQDNMQAELNRLQAENDASKEEVKEVLQALEELAV--N 501

  Fly   610 FEFEAHKKSSKLRVDDLLS-ALLEKESTIESLQKSLDNLTRDVLRNSKEGHMLSIAPEQEDIA-- 671
            ::.::.:...|.:..:||| .|.:|.:|:.|:...|..| :::..:.|:.....:|...:|:|  
Mouse   502 YDQKSQEVEDKTKEYELLSDELNQKSATLASIDAELQKL-KEMTNHQKKRAAEMMASLLKDLAEI 565

  Fly   672 ----GDSICNKCE-----ELEKLIADLESKKNSCE-------CDQLRLEIVSVRDKLESVESAFN 720
                |::...:.|     :.|..:|.|...|...|       |.||.........|:|..|....
Mouse   566 GIAVGNNDVKQPEGTGMIDEEFTVARLYISKMKSEVKTMVKRCKQLESTQTESNKKMEENEKELA 630

  Fly   721 LASSEIIQKATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHEKHEHVQEKYQKL 785
            .....|.|.....:.|::.|...:....||:|..|:|.::....:|            |||..::
Mouse   631 ACQLRISQHEAKIKSLTEYLQNVEQKKRQLEESVDSLGEELVQLRA------------QEKVHEM 683

  Fly   786 QEEYEQLESRARSASSAEFQRLQNDNTKFQADIASLNERLEEAQNMLTEVQNSESTV----EKLR 846
            ::|:......|.....|..|::|:.....|..|:||.:.:|..:.::|::|:....:    |:||
Mouse   684 EKEHLNKVQTANEVKQAVEQQIQSHRETHQKQISSLRDEVEAKEKLITDLQDQNQKMVLEQERLR 748

  Fly   847 IQNHELTA-------KIKEL---ETNFEEMQREYDCLSNQLMESVQENDALREEIKQRPTSHVEE 901
            :::..|.|       |:.||   :...|:.:::...|...:.:.:|....||:...|...:.|: 
Mouse   749 VEHERLKATDQEKSRKLHELTVMQDRREQARQDLKGLEETVAKELQTLHNLRKLFVQDLATRVK- 812

  Fly   902 SMRSSGISSD----FDEQKQDINLL-HQFVQLSESVQQI---------ELQHHSGISRLFRANQM 952
              :|:.:.||    ...|||.|:.| :...||::..:|:         ||..   :.:..||...
Mouse   813 --KSAEVDSDDTGGSAAQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPK---LEKRLRATAE 872

  Fly   953 KLDQSEPGLKLCLESA-----EYIEEDNRQSDATEPICLKGFLKR-HRFQIKR 999
            ::...|..||...|:|     .|.:|.:|..:|...   |...:| |..||.:
Mouse   873 RVKALESALKEAKENASRDRKRYQQEVDRIKEAVRS---KNMARRGHSAQIAK 922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 130/293 (44%)
Motor_domain 8..321 CDD:277568 129/286 (45%)
Smc <680..1449 CDD:224117 81/366 (22%)
TMPIT 779..>867 CDD:285135 24/101 (24%)
Smc 1042..1910 CDD:224117
Kif5bNP_032474.2 KISc_KHC_KIF5 6..325 CDD:276820 129/286 (45%)
KISc 8..332 CDD:214526 131/304 (43%)
DUF4337 <462..>538 CDD:290935 15/77 (19%)
TACC 467..662 CDD:282818 37/197 (19%)
TMPIT 598..>686 CDD:285135 20/99 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 908..963 5/18 (28%)
Globular 915..963 3/8 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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