DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cmet and Kif4

DIOPT Version :10

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:NP_032472.2 Gene:Kif4 / 16571 MGIID:108389 Length:1231 Species:Mus musculus


Alignment Length:1595 Identity:361/1595 - (22%)
Similarity:615/1595 - (38%) Gaps:504/1595 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IQVCIKVRPCEPGLTSLWQVKERRSIHLADSHAEP---------YVFDYVFDEGASNQEVFDRMA 64
            ::|.::.||    |.|. ::||.....|:....||         :.:|:|||.....:|||:...
Mouse    10 VRVALRCRP----LVSK-EIKEGCQTCLSFVPGEPQVVVGNDKSFTYDFVFDPSTEQEEVFNTAV 69

  Fly    65 KHIVHACMQGFNGTIFAYGQTSSGKTYTMMG----DEQNP---GVMVLAAKEIFQQISSETERDF 122
            ..::....:|:|.|:.|||||.|||||:|.|    ::::.   ||:....:.:|::|:.:::.:|
Mouse    70 APLIKGVFKGYNATVLAYGQTGSGKTYSMGGAYTAEQEHDSAIGVIPRVIQLLFKEINKKSDFEF 134

  Fly   123 LLRVGYIEIYNEKIYDLL---NKKNQDLKIHES-GNGIVNVNCEECIITSEVDLLRLLCLGNKER 183
            .|:|.|:|||||:|.|||   .:|...:.|.|. ..||..|...|..:....|.:..|..||..|
Mouse   135 TLKVSYLEIYNEEILDLLCSSREKATQINIREDPKEGIKIVGLTEKTVLVASDTVSCLEQGNNSR 199

  Fly   184 TVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGSERADQTGARGARLKEGG 248
            ||..|.||.:||||||||.|.||.||.  :|.::..:|.|:|||||||||..:|.|.|.||:||.
Mouse   200 TVASTAMNSQSSRSHAIFTISIEQRKK--NDKNSSFRSKLHLVDLAGSERQKKTKAEGDRLREGI 262

  Fly   249 HINKSLLFLSNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTSIICTIKP--SIMEESQST 311
            :||:.||.|.|||.:|.::....|..||||||||:||.|||||:.|.:|..:.|  |.:||:.:|
Mouse   263 NINRGLLCLGNVISALGDDKKGNFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNT 327

  Fly   312 LSFATRAKKIRIKPQVNEMVSDATMMKRLEREIKVLKDKLAE------------EERKN------ 358
            |.:|.||:||:.||.:| :...|..:..|:::::.|:..|.:            |..:|      
Mouse   328 LRYADRARKIKNKPIIN-IDPQAAELNHLKQQVQQLQILLLQAHGGTLPGDINVEPSENLQSLME 391

  Fly   359 ENQQKVEHLER----------QIKHDMHKIICGHSLSDKGQQK----RRRTWCPTASGSHLELAE 409
            :||..||..|:          |....:.:||.....::|...|    ||...|..   ...:|.|
Mouse   392 KNQSLVEENEKLSRGLSEAAGQTAQMLERIILTEQANEKMNAKLEELRRHAACKV---DLQKLVE 453

  Fly   410 TGTTEDRIDQFPKVSHLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECID 474
            |...::..:....:.:|.:.:...:..|..   .:..||:..|..|...:|:..:          
Mouse   454 TLEDQELKENIEIICNLQQVIAQLSDEAAA---CMTATIDTAGEADTQVQSSPDT---------- 505

  Fly   475 FGSPRPDVLKPMLTIRQLPDLPLTPKGPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKEKL 539
              |...||......:||.              ::.||:              :|..:...|||.|
Mouse   506 --SRSSDVFSTQHALRQA--------------QMSKEL--------------IELNKALALKEAL 540

  Fly   540 AEVTAQRDN-LEQESLAEKERYDALEKEVTSLRADNE------------AANSKISELEEKLSTL 591
            |:...|.|| |:......::....||.||.||:.:.|            |..:|:||...|    
Mouse   541 AKKMTQNDNQLQPIQFQYQDNIKNLESEVLSLQREKEELVLELQTAKKDANQAKLSERRRK---- 601

  Fly   592 KQTMRIMEVENQVAVGLEFEFEAHKKSSKLRVDDLLSALLEKESTIESLQKSLDNLTRDVLRNSK 656
                |:.|:|.|:|       :..||             |:::|.:..|::|.:           
Mouse   602 ----RLQELEGQIA-------DLKKK-------------LQEQSKLLKLKESTE----------- 631

  Fly   657 EGHMLSIAPEQEDIAGDSICNKCEELEKLIADLESKKNSCECDQLRLEIVSVRDKLESVESAFNL 721
              |.:|                     ||..::...||.      |::::.              
Mouse   632 --HTVS---------------------KLNQEIRMMKNQ------RVQLMR-------------- 653

  Fly   722 ASSEIIQKATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHEKHEHVQEKYQKLQ 786
                  |...|.|:.                      :||:.|        :..|.:|.|.:..:
Mouse   654 ------QMKEDAEKF----------------------RQWKQQ--------KDKEVIQLKERDRK 682

  Fly   787 EEYEQLESRARSASSAEFQRLQNDNTKFQADIASLNERLEEAQNMLTEVQNSESTVEKLRIQNHE 851
            .:||.|:      ....||:..|...:...:.|:.|:||::|      :|..:...||.:     
Mouse   683 RQYELLK------LERNFQKQSNVLRRKTEEAAAANKRLKDA------LQKQKEVAEKRK----- 730

  Fly   852 LTAKIKELETNFEEMQREYDCLSNQLMESVQENDALREEIKQRPTSHVEESMRSSGISSDFDEQK 916
                    ||....|:.....:.|.|...:                   |.|.|:      :|.|
Mouse   731 --------ETQSRGMESTAARMKNWLGNEI-------------------EVMVST------EEAK 762

  Fly   917 QDIN-LLHQFVQLSESVQQIELQHHSGISRLFRANQMKLDQSEPGLKLCLESAEYIEEDNRQSDA 980
            :.:| ||.:...|::.|.|::.:..||              ..|.||                  
Mouse   763 RHLNGLLEERKILAQDVAQLKEKRESG--------------ENPPLK------------------ 795

  Fly   981 TEPICLKGFLKRHRFQIKRLSQEHVDMGEEKRLLDIISQLEQEIEEKSALMEATEATINEMREQM 1045
                     |:|..|....:..:  |.|.|..:...|..||.|:|.:||              |:
Mouse   796 ---------LRRRTFSYDEIHGQ--DSGAEDSIAKQIESLETELELRSA--------------QI 835

  Fly  1046 TNLESALLEKSVIINKVEDYQRQIESLEKQNAEMTMVYEELQDRVTRESSMSESLLRVPPDEDTL 1110
            .:|:..||:                             .|.:||                     
Mouse   836 ADLQQKLLD-----------------------------AESEDR--------------------- 850

  Fly  1111 PGCPTSPSRREQEVATLKTSITELQSQVSDLKAELENHLRQIQLKDGNIARLQTDFEEMSERCLS 1175
                  |.:|.:.:||    |.|.:..:..|..||.:  .:|.     :::|::...:....|:.
Mouse   851 ------PKQRWESIAT----ILEAKCAIKYLVGELVS--SKIL-----VSKLESSLNQSKASCID 898

  Fly  1176 MEVRLAELDE-----DTKQKQELLDRQAQKLSDDLCLIDQLQKKNAQLVEQYHKATESLSLADAK 1235
            ::..|.|...     :|:.|:||:..:.|.....|.|:.|||:  :|:.|:  :..||:|     
Mouse   899 VQKMLFEEQNHFAKIETELKEELVKVEQQHQEKVLYLLSQLQQ--SQMTEK--QLEESVS----- 954

  Fly  1236 PDQILLSSQYDSQIEKLNQLLNAAKDELHDVRRIKD---------DEISALRMEF-LLQIETNEK 1290
                          ||..|||:..|.:..::|::::         .|.||::.:. |||:.:.:|
Mouse   955 --------------EKEQQLLSTLKCQEEELRKMQEVCEQNQQLLQENSAIKQKLTLLQVASKQK 1005

  Fly  1291 ENQAKFYAELQETKDRY---ESNVAELKEKLLQVEETLSSVTVRCQAELEALKSAHKENISQAVE 1352
            .:..:...:..::...|   :.....:|||.|  |::.:...::..:|....:..::::...|.|
Mouse  1006 PHLTRNIFQSPDSSFEYIPPKPKPCRIKEKCL--EQSFAVEGLQYYSEPSVAEQDNEDSDDHADE 1068

  Fly  1353 E--RNNLIVQHQAEME--TIRETLKNKLAEASTQQSKMEDAFRAEINEVRATLMEQ-------LN 1406
            |  ...|:...:..::  :.:....||......|:|....:...:..:.|.....|       ||
Mouse  1069 EWIPTKLVKVSKKSIQGCSCKGWCGNKQCGCRKQKSDCNVSCSCDPTKCRNRHQNQDNSDAIELN 1133

  Fly  1407 QTKEDRDKGASKLEE------------------VKKTLEQMINGGRVM--------SDTIAELEK 1445
            |..|:    :.|||:                  ..|.|::|.:..:|.        |....||:.
Mouse  1134 QDSEN----SFKLEDPTEVTSGLSFFHPICATPSSKILKEMCDADQVQLKQPVFVSSSDHPELKS 1194

  Fly  1446 --TKAEQDLAVNKLTK----DNIELEKQCSKTQEQ 1474
              ::::::.|:.|..|    .|......||..||:
Mouse  1195 IASESQENKAIGKKKKRALASNTSFFSGCSPIQEE 1229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 Motor_domain 8..321 CDD:473979 134/333 (40%)
SMC_prok_B 539..1431 CDD:274008 170/952 (18%)
SMC_prok_B 1137..1926 CDD:274008 76/399 (19%)
YhaN 1717..2182 CDD:443752
Kif4NP_032472.2 KISc_KIF4 8..338 CDD:276823 135/334 (40%)
Smc <518..>1005 CDD:440809 150/829 (18%)
Globular 1001..1231 40/235 (17%)
Pre-SET <1082..1120 CDD:461530 5/37 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1189..1212 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.

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