DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmet and KIF18B

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:XP_011522687.1 Gene:KIF18B / 146909 HGNCID:27102 Length:873 Species:Homo sapiens


Alignment Length:619 Identity:187/619 - (30%)
Similarity:292/619 - (47%) Gaps:140/619 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSIQVCIKVRPCEP-GLTS----LWQVKERR--------------SIHLADSHAEP--------Y 44
            |::||.::|||..| .|.|    :.||.:.|              .:....:|..|        :
Human    15 STLQVVVRVRPPTPRELDSQRRPVVQVVDERVLVFNPEEPDGGFPGLKWGGTHDGPKKKGKDLTF 79

  Fly    45 VFDYVFDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGDEQNPGVMVLAAKE 109
            |||.||.|.|:.|:||......::.:.:||:|.::||||.|.:|||:||:|.|.:||:|.|...|
Human    80 VFDRVFGEAATQQDVFQHTTHSVLDSFLQGYNCSVFAYGATGAGKTHTMLGREGDPGIMYLTTVE 144

  Fly   110 IFQQISS-ETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHES-GNGIVNVNCEECIITSEVDL 172
            :::::.: :.|:.|.:.:.|.|:|||:|:|||..|. .|.|.|. ..|:|..........|...|
Human   145 LYRRLEARQQEKHFEVLISYQEVYNEQIHDLLEPKG-PLAIREDPDKGVVVQGLSFHQPASAEQL 208

  Fly   173 LRLLCLGNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGSERADQT 237
            |.:|..||:.||...|:.|..||||||||:|.::.:........||..:.::|:||||||||..|
Human   209 LEILTRGNRNRTQHPTDANATSSRSHAIFQIFVKQQDRVPGLTQAVQVAKMSLIDLAGSERASST 273

  Fly   238 GARGARLKEGGHINKSLLFLSNVIKSLSENADNRFTN--YRDSKLTRILQASLGGNAFTSIICTI 300
            .|:|.||:||.:||:|||.|.||:.:|:: |..|.|:  ||||||||:|:.|||||..|.:|..|
Human   274 HAKGERLREGANINRSLLALINVLNALAD-AKGRKTHVPYRDSKLTRLLKDSLGGNCRTVMIAAI 337

  Fly   301 KPSIM--EESQSTLSFATRAKKIRIKPQVNEMVSD------ATMMKRLEREIKVLKDKLAEEERK 357
            .||.:  |::.:||.:|.|||:||:..:.|....|      ||:.::|:.|:..|:.||...|..
Human   338 SPSSLTYEDTYNTLKYADRAKEIRLSLKSNVTSLDCHISQYATICQQLQAEVAALRKKLQVYEGG 402

  Fly   358 NE-----------NQQKVEHL--------------------------------ERQIKHDMHKII 379
            .:           :....|||                                |.|::..|.   
Human   403 GQPPPQDLPGSPKSGPPPEHLPSSPLPPHPPSQPCTPELPAGPRALQEESLGMEAQVERAME--- 464

  Fly   380 CGHSL--------SDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPKVSHLPKPVFFHTSN 436
             |:|.        .|:|..:...|..|..:.:|           .:.:.|:::..||||..|.|.
Human   465 -GNSSDQEQSPEDEDEGPAEEVPTQMPEQNPTH-----------ALPESPRLTLQPKPVVGHFSA 517

  Fly   437 -----------------AGKRWDNIPKTINILGSLDIGTESNSISEEFLPAECIDFGS------- 477
                             ..:|..::.:..|:| :.|:.||..:: ::.:..|.|:.|:       
Human   518 RELDGDRSKQLALKVLCVAQRQYSLLQAANLL-TPDMITEFETL-QQLVQEEKIEPGAEALRTSG 580

  Fly   478 -PRPDVLKPMLTIRQLP-DLPLTPK-----GPLT 504
             .|...|...|....:| ..||.|:     ||:|
Human   581 LARGAPLAQELCSESIPVPSPLCPEPPGYTGPVT 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 137/352 (39%)
Motor_domain 8..321 CDD:277568 135/345 (39%)
Smc <680..1449 CDD:224117
TMPIT 779..>867 CDD:285135
Smc 1042..1910 CDD:224117
KIF18BXP_011522687.1 KISc_KIP3_like 16..360 CDD:276821 135/345 (39%)
KISc 18..367 CDD:214526 137/350 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0242
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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