DRSC/TRiP Functional Genomics Resources

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Protein Alignment cmet and kif18b

DIOPT Version :9

Sequence 1:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster
Sequence 2:XP_002939283.3 Gene:kif18b / 100490953 XenbaseID:XB-GENE-5960389 Length:872 Species:Xenopus tropicalis


Alignment Length:1065 Identity:252/1065 - (23%)
Similarity:416/1065 - (39%) Gaps:318/1065 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAKNASSIQVCIKVRPCEPGLTSLWQVKERRSIHLADSHA---------------EP-------- 43
            |:....::.|.::|||...        :|:...|    ||               ||        
 Frog     6 SSTEEGNVSVVVRVRPPNQ--------REQEGNH----HAVVQVVDHNMLVFDPDEPETTGVFSS 58

  Fly    44 ---------------YVFDYVFDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTM 93
                           ::||.:|.|.:..|:||:...|.|:...:.|:|.::||||.|.:|||:||
 Frog    59 LRGNDGPKRKGKDMKFIFDRIFGENSRQQDVFEHTTKEILDGVLNGYNCSVFAYGATGAGKTHTM 123

  Fly    94 MGDEQNPGVMVLAAKEIFQQISS-ETERDFLLRVGYIEIYNEKIYDLLNKKNQDLKIHES-GNGI 156
            :|.|.:||||.|...|::::|.: :.|:...:.:.|:|:|||:|.|||..:. .|.|.|. ..|:
 Frog   124 LGSEADPGVMYLTMVELYRRIEAIKEEKSCEVLISYLEVYNEQIQDLLEPRG-SLAIREDPQKGV 187

  Fly   157 VNVNCEECIITSEVDLLRLLCLGNKERTVGETNMNERSSRSHAIFKIIIESRKSDHSDDDAVIQS 221
            |..........|...||::|..||..||...|:.|..||.|||:|:|.::.:....|....|..:
 Frog   188 VVQGLSFHQPKSADQLLQMLASGNLNRTQHPTDANASSSHSHAVFQIYVKQQDRTVSISQDVRVA 252

  Fly   222 VLNLVDLAGSERADQTGARGARLKEGGHINKSLLFLSNVIKSLSE-NADNRFTNYRDSKLTRILQ 285
            .::|:||||||||..|.|:|.||:||.:||:|||.|.|||.:|:: .:......||||||||:|:
 Frog   253 KMSLIDLAGSERASTTNAKGERLREGANINRSLLALINVINALADAKSKKAHIPYRDSKLTRLLK 317

  Fly   286 ASLGGNAFTSIICTIKPSIM--EESQSTLSFATRAKKIRIKPQVNEMVSD------ATMMKRLER 342
            .|:|||..|.:|..|.||.:  :::.:||.:|.|||:|::..:.|.:..|      |.:.:.|:.
 Frog   318 DSIGGNCRTVMIAAISPSALSYDDTYNTLKYANRAKEIKLSMKSNVINLDCHISKYAAVCEELKA 382

  Fly   343 EIKVLKDKLAEEERKNENQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLEL 407
            |:..|::||...|.|.:......               .:||.||...:|.            |.
 Frog   383 EVAELREKLRFYEMKEQPDDDTS---------------DNSLQDKTSPRRE------------EH 420

  Fly   408 AETGTTEDRIDQFPKVSHLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAEC 472
            ::.|:.|.                      |.            |:|.:.| |:..|::..||| 
 Frog   421 SDLGSPEQ----------------------GS------------GALLLST-SSCQSQDHKPAE- 449

  Fly   473 IDFGSPRPDVLKPMLTIRQLPDLPLT--------PKGPLTTDKIKKEIQDLQMFTSLEKHFEVEC 529
                      :.|    |:...:||.        .|.|...:.:|.:..: ::.|||......:|
 Frog   450 ----------MNP----RKWDQVPLNCSLGREELEKNPCLHEALKDDAAE-RLVTSLLNFVRKQC 499

  Fly   530 E--EVQGLKEKLAEVTAQRDNLEQ-ESLAEKERYDALEKEVTSLRADNEAANSKISELEEKLSTL 591
            |  ::.||.....|     |.|.| |.||              ||. .:|...|::|.|:     
 Frog   500 EILKLAGLYTPELE-----DELRQLEGLA--------------LRG-QKATAEKVTEKEQ----- 539

  Fly   592 KQTMRIMEVENQVAVGLEFEFEAHKKSSKL----RVDDLLSALLEKESTIESLQKSLDNLTRDVL 652
                          |..|.|.|.||:..::    .|:|::..:  ||..||      |.:.....
 Frog   540 --------------VTEEHEMETHKEQEEVPQTPLVEDVVFDI--KEEVIE------DPVPPARK 582

  Fly   653 RNSKEGHMLSIAPEQEDIAGDSICNKCEELEKLIADLESKKNSCECDQLRLEIVSVRDKLESVES 717
            |...:.:...|.|:                           ||   ..||..||.|:        
 Frog   583 RKPGKRYRADILPD---------------------------NS---PSLRSPIVPVK-------- 609

  Fly   718 AFNLASSEIIQKATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTLHEKHEHVQEKY 782
                                              .|.:|.:...:|:.||:.:..|    ||.| 
 Frog   610 ----------------------------------RRREATNTPTKARLAGVPSTPE----VQVK- 635

  Fly   783 QKLQEEYEQLESRARSASSAEFQRLQNDNTKFQADIASLNERLEEAQNMLTEVQNSE---STVEK 844
               :.....:.||.|.:..:....|.: |.|   ||||      :..::.|..|.::   .||.|
 Frog   636 ---RPRKSSIPSRCRVSLRSSLNLLPS-NAK---DIAS------QPPSLCTPKQTAKIQSQTVTK 687

  Fly   845 LR-------IQNHELTAKI-------KELETNFEEMQREYDCLSNQLMESVQENDALREEIKQRP 895
            .|       |||   .|.:       :::.|.|:  ..|..|..:::.::|....:.....:..|
 Frog   688 SRMPLGTSAIQN---CASVPAAALAPRDMNTTFD--LSEEGCFVSEMDKTVTFGTSDFPGWENVP 747

  Fly   896 TSHVEESMRSSGISSDFDEQKQDINLLHQFVQLSESVQQIELQHHSGISRLFRANQMKLDQSEPG 960
            ..:::.:...|...:.|..:...:|.::.....|.:......:..|..|.:.||.:..|.||   
 Frog   748 IHNIDTTFGKSSDVAVFSVKGLSVNHMNANQMTSAAKSYSHKRRRSSSSSMSRAGKGTLAQS--- 809

  Fly   961 LKLCLESAEYIEEDNRQSDATEPIC 985
             ::.......:::..:....:|.||
 Frog   810 -RIARLQMSTVKKSQQPPTISESIC 833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cmetNP_524993.3 KISc 8..328 CDD:214526 125/362 (35%)
Motor_domain 8..321 CDD:277568 124/355 (35%)
Smc <680..1449 CDD:224117 56/323 (17%)
TMPIT 779..>867 CDD:285135 24/104 (23%)
Smc 1042..1910 CDD:224117
kif18bXP_002939283.3 KISc_KIP3_like 23..355 CDD:276821 120/344 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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