DRSC/TRiP Functional Genomics Resources

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Protein Alignment cic and Hbp1

DIOPT Version :9

Sequence 1:NP_001262755.1 Gene:cic / 53560 FlyBaseID:FBgn0262582 Length:2150 Species:Drosophila melanogaster
Sequence 2:XP_006515290.1 Gene:Hbp1 / 73389 MGIID:894659 Length:570 Species:Mus musculus


Alignment Length:668 Identity:128/668 - (19%)
Similarity:230/668 - (34%) Gaps:195/668 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   696 SRHLNQ--KGNTSALPSSTGPGRLLSDSRSSSKTQIDE--DTSRDSETSPNYRVKGRYDQEETDA 756
            |.|.|.  :..|:.:|::.....|:.|.|:...:...|  ..:.:..:||.|.....:.:.:...
Mouse     6 SEHHNMVWEVKTNQMPNAVQKLLLVMDKRAPGMSDSLELLQCNENLPSSPGYNSCDEHMELDDLP 70

  Fly   757 AAMLVSLSSSRSATPSYTSPVNHAGASPLNAIAHSPVNV-SATHRQ---NFFTPIANQSQQQQQQ 817
            ....|....::||....:|.|:|. ..|.::.:.:..:: ..|||:   ::.|.:||.:...|  
Mouse    71 ELQAVQSDPTQSAIYQLSSDVSHQ-EYPRSSWSQNTSDIPENTHREDEVDWLTELANIATSPQ-- 132

  Fly   818 QPVAVPLDSKWKTTPSPVLYNANNNSSNNNTSSSNNNNNSNWEVGSNSNTHVAATAAATSTVGAQ 882
                           ||::..:..|.|                    |..|:.||:         
Mouse   133 ---------------SPLMQCSFYNRS--------------------SPVHIIATS--------- 153

  Fly   883 PLPPQTTPVSLVMHAPPPQQQPLQQQHHHHQPPPPPPASLPAPSAPPTSGSSSSHNSVGHATSVI 947
                                   :..|.:.:|||...:|...|:.|        |:.....|.| 
Mouse   154 -----------------------KSLHSYARPPPVSSSSKSGPAFP--------HDHWKEETPV- 186

  Fly   948 RISSSQQQHQQQQQHQQQAHPHVVVSGGQTFHPVIVDATQL----SVP-------LPPTTVSFHQ 1001
                   :|::.....:         .|......:.|...|    |.|       |..|.:.||:
Mouse   187 -------RHERANSESE---------SGIFCMSSLSDDDDLGWCNSWPSTIWHCFLKGTRLCFHK 235

  Fly  1002 PNTPT-------STAASVASMSQDKMLAKNGYNAPWFKLLPHMTPMS--------KASPAPVTPT 1051
            .:...       :.|||..:..:.:|....||.:...|||.|...:|        ...|..|...
Mouse   236 ESNKEWQDVEDFARAASCDNEEEIQMGTHKGYGSDGLKLLSHEESVSFGESVLKLTFDPGTVEDG 300

  Fly  1052 LTTSASSYNVVMMQQQQQHQQLQQQQQLQQQQQSPPQMPLNHNNNHLIVSAPLSSPGKPLNCSMN 1116
            |.|         ::.:..|                |....|...:....|..:...|.|. |.::
Mouse   301 LLT---------VECKLDH----------------PFYVKNKGWSSFYPSLTVVQHGIPC-CEIH 339

  Fly  1117 DAKVAAAAAAAAVANQRQKQQQEEPDDQLDDD--VFET-----TTP-------GISANSKKQTAA 1167
            ...|.....              .||....||  ||:|     .||       .:|:.::::.|:
Mouse   340 IGDVCLPPG--------------HPDAINFDDSGVFDTFKSYDFTPMDSSAVYVLSSMARQRRAS 390

  Fly  1168 MRLPTHNSNIRKLEECHDDGAAGAPATSAAKRRSQSLSALQQQQQQQQQAGAAGTAAGQPANKKI 1232
            :.........::........:.|:|.:|.....|....|::..        ::||.:....| |.
Mouse   391 LSCGGGPGTGQEFSGSEFSKSCGSPGSSQLSSSSLYAKAVKSH--------SSGTVSATSPN-KC 446

  Fly  1233 RRPMNAFMIFSKKHRKMVHKKHPNQDNRTVSKILGEWWYALKPEQKAQYHELASSVKDAHFKLHP 1297
            :|||||||:|:||:|....:.:|.:|||.:|.|||:.|..:|.|::..|...|.::.:...:|:|
Mouse   447 KRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVILGDRWKKMKNEERRMYTLEAKALAEEQKRLNP 511

  Fly  1298 EWKWCSKDRRKSSTSTAT 1315
            :   |.|.:|.:|.|.::
Mouse   512 D---CWKRKRTNSVSVSS 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cicNP_001262755.1 DUF4819 349..431 CDD:292708
SOX-TCF_HMG-box 1231..1302 CDD:238684 27/70 (39%)
Hbp1XP_006515290.1 AXH 224..350 CDD:197779 27/165 (16%)
SOX-TCF_HMG-box 445..516 CDD:238684 28/73 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2746
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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