DRSC/TRiP Functional Genomics Resources

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Protein Alignment cic and Bbx

DIOPT Version :9

Sequence 1:NP_001262755.1 Gene:cic / 53560 FlyBaseID:FBgn0262582 Length:2150 Species:Drosophila melanogaster
Sequence 2:XP_006522606.1 Gene:Bbx / 70508 MGIID:1917758 Length:937 Species:Mus musculus


Alignment Length:1052 Identity:207/1052 - (19%)
Similarity:326/1052 - (30%) Gaps:380/1052 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1202 QSLSALQQQQQQQQQAGAAGTAAGQPANKKIRRPMNAFMIFSKKHRKMVHKKHPNQDNRTVSKIL 1266
            :.:..:|..:....:...|.|...:...::.|||||||::|.|:||.:|.::||..|||..:|||
Mouse    50 EDIDKVQLLEADGLEQDVAETEDDESPEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKIL 114

  Fly  1267 GEWWYALKPEQKAQYHELASSVKDAHFKLHPEWKWCSKDRR--KSSTSTATPGGKASGAAGTGDA 1329
            .:||..|.|::|.:|.::|...|||..|.:|.::||....:  ||.|.|..|             
Mouse   115 ADWWAVLDPKEKQKYTDMAKEYKDAFMKANPGYRWCPTTNKPVKSPTPTVNP------------- 166

  Fly  1330 KQRLVSVDGSDSLEHDMCPSTPGGSGSCGGQGISSDLQGDIIPLTIDNYNSTCDEAPTTISMKGN 1394
            :::|.:.              |..|        |.||                   ||.      
Mouse   167 RKKLWAF--------------PPDS--------SRDL-------------------PTP------ 184

  Fly  1395 GNGKLMKNELP------SDEDE----QMLVVEEEQQQQTVKKIDLHCRERVNDSDMDDTPFDYRK 1449
               |..|.|:|      :|..:    .||::..|....|.:.....||..:::|           
Mouse   185 ---KKAKTEVPQLNFGMADPTQMGGLSMLLLAGEHALGTPEASSGTCRPDISES----------- 235

  Fly  1450 QQPEANQRS-----AEEHSTSGANGQAINAPPLSGGEREITLKPKAIKAHPVLESNMLPYTQMSI 1509
              ||..|:|     ||..|.:                           :||...|.....:.:..
Mouse   236 --PELRQKSPLFQFAEISSRT---------------------------SHPDAPSKQCQASALFQ 271

  Fly  1510 YTQYTSPKNPIGVT-PFQPTGGA--FKSMPISPKGSGGKPEDAGSLQAHIKQED----------- 1560
            :.:.:|..:.:|.| |.:..|.:  |:...:.....|.|.||...:::  |:.|           
Mouse   272 FAEISSSTSQLGGTEPVKRCGNSALFQLAEMCLASEGVKMEDTKLIKS--KESDGGRIEEIEKGK 334

  Fly  1561 ------IKQEPPSPYKLNNGSGSASGGGVVSAPPPNSGSVGAIFNFNVPTATAL----------- 1608
                  :::...:.::.....|.::.|.|     ..|..:..|....:....|:           
Mouse   335 EERGTEVEKTTETSFQKEAEFGKSAKGNV-----RESKDLRDIEQLQMDNVMAIKVEDPKEIRKE 394

  Fly  1609 ---SQKQFHYP---------------------MHHPH-----RSPTDLRAAHQACVPSSPAGMGL 1644
               .||..|:|                     |.|||     ..||.|....:.........:. 
Mouse   395 PEDDQKYSHFPDFSYSASSKIIISGVPSRKDHMCHPHGIMIIEDPTTLNKPEKIKKKKKKNKLD- 458

  Fly  1645 GHAANIATPPASAPAQIMGGGPASQKMFFAMTHPYTLLQRSHQPGTPSLEHLQ--LDAFAPGGYT 1707
            .|..:.:||..:.                          :..|.....:|.:.  ::|.|.|.: 
Mouse   459 RHGNDKSTPKKTC--------------------------KKRQSSESDIESVMYTIEAVAKGDW- 496

  Fly  1708 LRNHNGLSSL--PPPVSAQPTM-----LLHGYPPSHGVEPPARSPSYKSMPSTPKSATYLMSAPP 1765
                 |:..|  .|....:|:.     :|...||...|:...:..|.:......|.     |.||
Mouse   497 -----GVDKLGETPRKKVRPSSSGKGGILDAKPPKKKVKSKEKKVSKEKCSDITKE-----SRPP 551

  Fly  1766 ERGMDGGMSGCASAAASGGDESDIDADGQQFILAPT-----PAQLGRAPLQ------RRKNLSQS 1819
            :     .:|..||.:..|.....|.|:.    |.||     |:..|:|..:      :.:.....
Mouse   552 D-----FLSISASKSVPGEVPEGIKAEP----LTPTEDALPPSLPGQAKPEDSDCHRKTETCGSR 607

  Fly  1820 KSESNVSFGANLGASNGQHISRKLHSPTMMESSSPIIGHVNSSNLSSALPTPTSSTTTPNSDEQL 1884
            |||.:..     ||     :.:.|.|..|:.|   :..:|:....||....        :||.: 
Mouse   608 KSERSCK-----GA-----LYKTLVSEGMLTS---LRANVDRGKRSSGKGN--------SSDHE- 650

  Fly  1885 PLTPTTSSSNSNLNQQQPKSPMKGAPGSTAAALKKKNDEMNNSVLKQVDFEKKYKALPQFQP--- 1946
               ...|..:...||       .|..||.....|.:.|....|.....:||||:.:|||:.|   
Mouse   651 ---GCWSEESWTFNQ-------SGTSGSKKFKKKLREDSFLGSAKLDEEFEKKFNSLPQYSPITF 705

  Fly  1947 -EDCQSPSAIAVPSSPRVYG--------------------------TNYRKKNTAP--------- 1975
             ..|     ::.|...:..|                          :.|:.|...|         
Mouse   706 DRKC-----VSTPRKKKKTGNMSSESTKTSKGPFQSQKKNLFHKIVSKYKHKKEKPNVPEKGSGD 765

  Fly  1976 ------------PPVQKLMCEDDSIDEPA-------SAP----PTTTQR-FFGPDFNNELKDE-- 2014
                        .|.:.:..||.|..|||       |.|    |||.|. ..|.......|.:  
Mouse   766 KWSHKQFFLDAIHPTEAIFSEDKSTTEPAFKVKNALSIPNTPEPTTMQEPLVGSQKRKARKTKIT 830

  Fly  2015 ---RLAELESSDQTGRSPRTPKTPLQSARSDASEKG--------HRKVLETRRSLVLQLFAEHGN 2068
               |.|:...|...|.....||..||  ||.....|        |..|.|.|.|.          
Mouse   831 HLVRTADGRVSPAGGTLDDKPKEQLQ--RSLPKVPGTYCGDNCSHSTVEEPRSST---------- 883

  Fly  2069 FPTAQATMAFQS 2080
             |...|..||.|
Mouse   884 -PDMPAVSAFFS 894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cicNP_001262755.1 DUF4819 349..431 CDD:292708
SOX-TCF_HMG-box 1231..1302 CDD:238684 32/70 (46%)
BbxXP_006522606.1 SOX-TCF_HMG-box 79..150 CDD:238684 32/70 (46%)
DUF2028 190..>322 CDD:312980 31/173 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2746
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D10281at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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