DRSC/TRiP Functional Genomics Resources

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Protein Alignment cic and hbp1

DIOPT Version :9

Sequence 1:NP_001262755.1 Gene:cic / 53560 FlyBaseID:FBgn0262582 Length:2150 Species:Drosophila melanogaster
Sequence 2:NP_001019602.2 Gene:hbp1 / 554137 ZFINID:ZDB-GENE-050522-414 Length:494 Species:Danio rerio


Alignment Length:500 Identity:104/500 - (20%)
Similarity:168/500 - (33%) Gaps:159/500 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   862 GSNSNTHVAATAAATSTVGAQPLPPQTTPVSLVMHAPPPQQQPL-----QQQHHHHQPPPPPPAS 921
            ||:|:|:.....|..:|....|         |:.:||..:..|:     ....|.:..||...:|
Zfish    98 GSDSHTNWLTELANIATSPQSP---------LLQNAPHTRSSPVHIFSSSSSLHSYARPPLSSSS 153

  Fly   922 LPAPSAP------PTSGSSSSHNSVGHATSVIRISSSQQQHQQQQQHQQQAHP-HVVVSGGQTFH 979
            .|:|:..      .|..||.|.      :.|..:||..........|...:.. |..:.|     
Zfish   154 APSPARSHMRERRRTRASSESE------SGVFCMSSLSDDDDLGWSHSWPSTAWHCFLKG----- 207

  Fly   980 PVIVDATQLSVPLPPTTVSFHQ-PNTPTSTAASVASMSQD-------KMLAKNGYNAPWFKLLPH 1036
                           |.:.||: ||.....|..|....:|       :......|.:...||:..
Zfish   208 ---------------TRLRFHKGPNVEWQEADDVLESDEDSDDERGAQSNPMKSYGSDGLKLVIF 257

  Fly  1037 MTPMS------KASPAPVTP---TLTTSAS-----------------SYNVVMMQQQQQHQQLQQ 1075
            ...:|      |.:..|.:|   .||...|                 |..||      :|.....
Zfish   258 EESVSFGQSVLKLTFDPGSPEAGLLTAECSLDHPFFVKNKGWSSFYPSLTVV------RHGIPCY 316

  Fly  1076 QQQLQQQQQSPPQMPLNHNNNHLIVSAPLSSPGKPLNCSMNDAKVAAAAAAAAVANQRQKQQQE- 1139
            ..|:......|......:.::.::.....|....||:.|       |....:::..||:..|.. 
Zfish   317 DMQVGDLCLPPGHRDAINCDDSVVFDTFKSYDFTPLDSS-------AVYVLSSMGRQRRASQSSG 374

  Fly  1140 ---EPD-DQLDDDVFETTTPGISANSKKQTAAMRLPTHNSNIRKLEECHDDGAAGAPATSAAKRR 1200
               .|| |:|:...|                     ||:|:..|.:..|..|::||..|      
Zfish   375 GAVSPDCDKLEALGF---------------------THHSSSSKSQRSHASGSSGATPT------ 412

  Fly  1201 SQSLSALQQQQQQQQQAGAAGTAAGQPANKKIRRPMNAFMIFSKKHRKMVHKKHPNQDNRTVSKI 1265
                                          |.:|||||||:|:||:|....:.:|.:|||.:|.|
Zfish   413 ------------------------------KCKRPMNAFMLFAKKYRVEYTQMYPGKDNRAISVI 447

  Fly  1266 LGEWWYALKPEQKAQYHELASSVKDAHFKLHPEWKWCSKDRRKSS 1310
            ||:.|..:|.|::..|...|.::.:...:|:|:   |.|.:|.:|
Zfish   448 LGDKWKKMKNEERRMYTMEAKALAEEQKRLNPD---CWKRKRTNS 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cicNP_001262755.1 DUF4819 349..431 CDD:292708
SOX-TCF_HMG-box 1231..1302 CDD:238684 27/70 (39%)
hbp1NP_001019602.2 AXH 210..328 CDD:285689 22/123 (18%)
SOX-TCF_HMG-box 413..484 CDD:238684 28/73 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2746
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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